Cluster: CGMR100448_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100448
- CGC Family ID: CGCFAM_00188
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_269151 | k141_269151_52 | 54254 | 55774 | - | 3.A.5.1.1 |
| STP | k141_269151 | k141_269151_53 | 55915 | 56331 | - | Sigma70_r4 |
| NULL(UNKNOWN) | k141_269151 | k141_269151_54 | 56358 | 56660 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_269151 | k141_269151_55 | 56660 | 57955 | - | GT2 |
Gene ID: k141_269151_52
Type: TC
Location: 54254 - 55774 (-)
Type: TC
Location: 54254 - 55774 (-)
Gene ID: k141_269151_53
Type: STP
Location: 55915 - 56331 (-)
Type: STP
Location: 55915 - 56331 (-)
Gene ID: k141_269151_54
Type:
Location: 56358 - 56660 (-)
Type:
Location: 56358 - 56660 (-)
Gene ID: k141_269151_55
Type: CAZyme
Location: 56660 - 57955 (-)
Type: CAZyme
Location: 56660 - 57955 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus_A
Species
Lactococcus_A raffinolactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.