Cluster: CGMR100448_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100448
- CGC Family ID: CGCFAM_00453
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_98181 | k141_98181_28 | 27881 | 29008 | + | 2.A.86.1.8 |
| TC | k141_98181 | k141_98181_29 | 29111 | 30466 | + | 9.A.40.2.1 |
| TC | k141_98181 | k141_98181_30 | 30884 | 31360 | + | 4.A.6.1.13 |
| TC | k141_98181 | k141_98181_31 | 31384 | 32184 | + | 4.A.6.1.13 |
| TC | k141_98181 | k141_98181_32 | 32177 | 32995 | + | 4.A.6.1.13 |
| TC | k141_98181 | k141_98181_33 | 32997 | 33425 | + | 4.A.6.1.19 |
| CAZyme | k141_98181 | k141_98181_34 | 33457 | 35127 | + | GH13_31 |
Gene ID: k141_98181_28
Type: TC
Location: 27881 - 29008 (+)
Type: TC
Location: 27881 - 29008 (+)
Gene ID: k141_98181_29
Type: TC
Location: 29111 - 30466 (+)
Type: TC
Location: 29111 - 30466 (+)
Gene ID: k141_98181_30
Type: TC
Location: 30884 - 31360 (+)
Type: TC
Location: 30884 - 31360 (+)
Gene ID: k141_98181_31
Type: TC
Location: 31384 - 32184 (+)
Type: TC
Location: 31384 - 32184 (+)
Gene ID: k141_98181_32
Type: TC
Location: 32177 - 32995 (+)
Type: TC
Location: 32177 - 32995 (+)
Gene ID: k141_98181_33
Type: TC
Location: 32997 - 33425 (+)
Type: TC
Location: 32997 - 33425 (+)
Gene ID: k141_98181_34
Type: CAZyme
Location: 33457 - 35127 (+)
Type: CAZyme
Location: 33457 - 35127 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus_A
Species
Lactococcus_A raffinolactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.