Cluster: CGMR100448_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100448
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_193411 | k141_193411_23 | 23260 | 24408 | - | CE9 |
| STP | k141_193411 | k141_193411_24 | 24436 | 25608 | - | SIS | SIS |
| TF | k141_193411 | k141_193411_25 | 25804 | 26532 | - | GntR |
| TC | k141_193411 | k141_193411_26 | 26699 | 27715 | - | 4.A.6.1.4 |
| TC | k141_193411 | k141_193411_27 | 27705 | 28511 | - | 4.A.6.1.4 |
| TC | k141_193411 | k141_193411_28 | 28657 | 29139 | - | 4.A.6.1.4 |
| pfam | k141_193411 | k141_193411_29 | 29172 | 29447 | - | YajC |
| TC | k141_193411 | k141_193411_30 | 29450 | 29890 | - | 4.A.6.1.16 |
Gene ID: k141_193411_23
Type: CAZyme
Location: 23260 - 24408 (-)
Type: CAZyme
Location: 23260 - 24408 (-)
Gene ID: k141_193411_24
Type: STP
Location: 24436 - 25608 (-)
Type: STP
Location: 24436 - 25608 (-)
Gene ID: k141_193411_25
Type: TF
Location: 25804 - 26532 (-)
Type: TF
Location: 25804 - 26532 (-)
Gene ID: k141_193411_26
Type: TC
Location: 26699 - 27715 (-)
Type: TC
Location: 26699 - 27715 (-)
Gene ID: k141_193411_27
Type: TC
Location: 27705 - 28511 (-)
Type: TC
Location: 27705 - 28511 (-)
Gene ID: k141_193411_28
Type: TC
Location: 28657 - 29139 (-)
Type: TC
Location: 28657 - 29139 (-)
Gene ID: k141_193411_29
Type: pfam
Location: 29172 - 29447 (-)
Type: pfam
Location: 29172 - 29447 (-)
Gene ID: k141_193411_30
Type: TC
Location: 29450 - 29890 (-)
Type: TC
Location: 29450 - 29890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus_A
Species
Lactococcus_A raffinolactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.