Cluster: CGMR100333_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR100333
- CGC Family ID: CGCFAM_01458
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_106471 | k141_106471_13 | 11753 | 13183 | + | GT5 |
| CAZyme | k141_106471 | k141_106471_14 | 13192 | 15435 | + | GT35 |
| CAZyme | k141_106471 | k141_106471_15 | 15435 | 17330 | + | GH13_14 |
| pfam | k141_106471 | k141_106471_16 | 17320 | 19014 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| STP | k141_106471 | k141_106471_17 | 19231 | 19734 | + | FHA |
| TC | k141_106471 | k141_106471_18 | 19727 | 20992 | + | 2.A.103.1.3 |
Gene ID: k141_106471_13
Type: CAZyme
Location: 11753 - 13183 (+)
Type: CAZyme
Location: 11753 - 13183 (+)
Gene ID: k141_106471_14
Type: CAZyme
Location: 13192 - 15435 (+)
Type: CAZyme
Location: 13192 - 15435 (+)
Gene ID: k141_106471_15
Type: CAZyme
Location: 15435 - 17330 (+)
Type: CAZyme
Location: 15435 - 17330 (+)
Gene ID: k141_106471_16
Type: pfam
Location: 17320 - 19014 (+)
Type: pfam
Location: 17320 - 19014 (+)
Gene ID: k141_106471_17
Type: STP
Location: 19231 - 19734 (+)
Type: STP
Location: 19231 - 19734 (+)
Gene ID: k141_106471_18
Type: TC
Location: 19727 - 20992 (+)
Type: TC
Location: 19727 - 20992 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.