Cluster: CGMR100272_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR100272
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_16508 | k141_16508_9 | 8294 | 9214 | + | 3.A.1.121.4 |
| STP | k141_16508 | k141_16508_10 | 9171 | 9707 | + | HD |
| NULL(UNKNOWN) | k141_16508 | k141_16508_11 | 9809 | 11389 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_16508 | k141_16508_12 | 11479 | 12909 | - | GT5 |
| pfam | k141_16508 | k141_16508_13 | 12961 | 14082 | - | NTP_transferase | Hexapep_GlmU |
| pfam | k141_16508 | k141_16508_14 | 14069 | 15298 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | k141_16508 | k141_16508_15 | 15334 | 17556 | - | CBM48 | GH13_9 |
Gene ID: k141_16508_9
Type: TC
Location: 8294 - 9214 (+)
Type: TC
Location: 8294 - 9214 (+)
Gene ID: k141_16508_10
Type: STP
Location: 9171 - 9707 (+)
Type: STP
Location: 9171 - 9707 (+)
Gene ID: k141_16508_11
Type:
Location: 9809 - 11389 (-)
Type:
Location: 9809 - 11389 (-)
Gene ID: k141_16508_12
Type: CAZyme
Location: 11479 - 12909 (-)
Type: CAZyme
Location: 11479 - 12909 (-)
Gene ID: k141_16508_13
Type: pfam
Location: 12961 - 14082 (-)
Type: pfam
Location: 12961 - 14082 (-)
Gene ID: k141_16508_14
Type: pfam
Location: 14069 - 15298 (-)
Type: pfam
Location: 14069 - 15298 (-)
Gene ID: k141_16508_15
Type: CAZyme
Location: 15334 - 17556 (-)
Type: CAZyme
Location: 15334 - 17556 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_16508_14 | vegetarian > vegan | 1.09377 | 0.00701 |