Cluster: CGMR100272_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100272
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_76429 | k141_76429_18 | 17521 | 18429 | + | 3.A.1.3.27 |
| TC | k141_76429 | k141_76429_19 | 18518 | 19186 | + | 3.A.1.3.12 |
| TC | k141_76429 | k141_76429_20 | 19198 | 19950 | + | 3.A.1.3.25 |
| pfam | k141_76429 | k141_76429_21 | 20052 | 20336 | + | PRC |
| CAZyme | k141_76429 | k141_76429_22 | 20400 | 21968 | + | CBM91 | GH43_11 |
Gene ID: k141_76429_18
Type: TC
Location: 17521 - 18429 (+)
Type: TC
Location: 17521 - 18429 (+)
Gene ID: k141_76429_19
Type: TC
Location: 18518 - 19186 (+)
Type: TC
Location: 18518 - 19186 (+)
Gene ID: k141_76429_20
Type: TC
Location: 19198 - 19950 (+)
Type: TC
Location: 19198 - 19950 (+)
Gene ID: k141_76429_21
Type: pfam
Location: 20052 - 20336 (+)
Type: pfam
Location: 20052 - 20336 (+)
Gene ID: k141_76429_22
Type: CAZyme
Location: 20400 - 21968 (+)
Type: CAZyme
Location: 20400 - 21968 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.