Cluster: CGMR100272_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100272
- CGC Family ID: CGCFAM_00805
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_50580 | k141_50580_3 | 2505 | 3131 | - | CBM13 |
| TC | k141_50580 | k141_50580_4 | 3561 | 5477 | + | 3.D.1.4.2 |
| TC | k141_50580 | k141_50580_5 | 5477 | 6343 | + | 3.D.1.4.2 |
| TC | k141_50580 | k141_50580_6 | 6360 | 6800 | + | 3.D.1.4.2 |
| pfam | k141_50580 | k141_50580_7 | 6820 | 7173 | + | Complex1_30kDa |
| TC | k141_50580 | k141_50580_8 | 7213 | 8292 | + | 3.D.1.4.2 |
Gene ID: k141_50580_3
Type: CAZyme
Location: 2505 - 3131 (-)
Type: CAZyme
Location: 2505 - 3131 (-)
Gene ID: k141_50580_4
Type: TC
Location: 3561 - 5477 (+)
Type: TC
Location: 3561 - 5477 (+)
Gene ID: k141_50580_5
Type: TC
Location: 5477 - 6343 (+)
Type: TC
Location: 5477 - 6343 (+)
Gene ID: k141_50580_6
Type: TC
Location: 6360 - 6800 (+)
Type: TC
Location: 6360 - 6800 (+)
Gene ID: k141_50580_7
Type: pfam
Location: 6820 - 7173 (+)
Type: pfam
Location: 6820 - 7173 (+)
Gene ID: k141_50580_8
Type: TC
Location: 7213 - 8292 (+)
Type: TC
Location: 7213 - 8292 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.