Cluster: CGMR100272_CGC27
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR100272
- CGC Family ID: CGCFAM_00142
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_9833 | k141_9833_33 | 32624 | 33514 | + | 3.A.1.1.10 |
| TC | k141_9833 | k141_9833_34 | 33535 | 34428 | + | 3.A.1.1.10 |
| STP | k141_9833 | k141_9833_35 | 34480 | 36144 | + | SBP_bac_1 |
| STP | k141_9833 | k141_9833_36 | 36173 | 37837 | + | SBP_bac_1 |
| CAZyme | k141_9833 | k141_9833_37 | 37861 | 38901 | + | GH109 |
| pfam | k141_9833 | k141_9833_38 | 38921 | 39736 | + | AP_endonuc_2 |
| NULL(UNKNOWN) | k141_9833 | k141_9833_39 | 39752 | 41224 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_9833 | k141_9833_40 | 41285 | 42316 | + | GH179 |
Gene ID: k141_9833_33
Type: TC
Location: 32624 - 33514 (+)
Type: TC
Location: 32624 - 33514 (+)
Gene ID: k141_9833_34
Type: TC
Location: 33535 - 34428 (+)
Type: TC
Location: 33535 - 34428 (+)
Gene ID: k141_9833_35
Type: STP
Location: 34480 - 36144 (+)
Type: STP
Location: 34480 - 36144 (+)
Gene ID: k141_9833_36
Type: STP
Location: 36173 - 37837 (+)
Type: STP
Location: 36173 - 37837 (+)
Gene ID: k141_9833_37
Type: CAZyme
Location: 37861 - 38901 (+)
Type: CAZyme
Location: 37861 - 38901 (+)
Gene ID: k141_9833_38
Type: pfam
Location: 38921 - 39736 (+)
Type: pfam
Location: 38921 - 39736 (+)
Gene ID: k141_9833_39
Type:
Location: 39752 - 41224 (+)
Type:
Location: 39752 - 41224 (+)
Gene ID: k141_9833_40
Type: CAZyme
Location: 41285 - 42316 (+)
Type: CAZyme
Location: 41285 - 42316 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.