Cluster: CGMR100272_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR100272
- CGC Family ID: CGCFAM_01639
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_62412 | k141_62412_39 | 48398 | 49285 | - | 3.A.1.1.10 |
| TC | k141_62412 | k141_62412_40 | 49299 | 50252 | - | 3.A.1.1.10 |
| STP | k141_62412 | k141_62412_41 | 50320 | 51651 | - | SBP_bac_1 |
| TF | k141_62412 | k141_62412_42 | 52000 | 54369 | - | HTH_AraC |
| CAZyme | k141_62412 | k141_62412_43 | 54385 | 56487 | - | GH42 |
| CAZyme | k141_62412 | k141_62412_44 | 56500 | 58650 | - | GH92 |
Gene ID: k141_62412_39
Type: TC
Location: 48398 - 49285 (-)
Type: TC
Location: 48398 - 49285 (-)
Gene ID: k141_62412_40
Type: TC
Location: 49299 - 50252 (-)
Type: TC
Location: 49299 - 50252 (-)
Gene ID: k141_62412_41
Type: STP
Location: 50320 - 51651 (-)
Type: STP
Location: 50320 - 51651 (-)
Gene ID: k141_62412_42
Type: TF
Location: 52000 - 54369 (-)
Type: TF
Location: 52000 - 54369 (-)
Gene ID: k141_62412_43
Type: CAZyme
Location: 54385 - 56487 (-)
Type: CAZyme
Location: 54385 - 56487 (-)
Gene ID: k141_62412_44
Type: CAZyme
Location: 56500 - 58650 (-)
Type: CAZyme
Location: 56500 - 58650 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.