Cluster: CGMR100272_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100272
- CGC Family ID: CGCFAM_02520
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_91229 | k141_91229_17 | 14153 | 15967 | - | 8.A.59.2.1 |
| NULL(UNKNOWN) | k141_91229 | k141_91229_18 | 15998 | 17974 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_91229 | k141_91229_19 | 18056 | 19585 | - | SBP_bac_1 | SBP_bac_8 |
| TC | k141_91229 | k141_91229_20 | 19679 | 20533 | - | 3.A.1.1.10 |
| TC | k141_91229 | k141_91229_21 | 20550 | 21488 | - | 3.A.1.1.10 |
| CAZyme | k141_91229 | k141_91229_22 | 21702 | 22793 | + | PL26 |
Gene ID: k141_91229_17
Type: TC
Location: 14153 - 15967 (-)
Type: TC
Location: 14153 - 15967 (-)
Gene ID: k141_91229_18
Type:
Location: 15998 - 17974 (-)
Type:
Location: 15998 - 17974 (-)
Gene ID: k141_91229_19
Type: pfam
Location: 18056 - 19585 (-)
Type: pfam
Location: 18056 - 19585 (-)
Gene ID: k141_91229_20
Type: TC
Location: 19679 - 20533 (-)
Type: TC
Location: 19679 - 20533 (-)
Gene ID: k141_91229_21
Type: TC
Location: 20550 - 21488 (-)
Type: TC
Location: 20550 - 21488 (-)
Gene ID: k141_91229_22
Type: CAZyme
Location: 21702 - 22793 (+)
Type: CAZyme
Location: 21702 - 22793 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.