Cluster: CGMR100272_CGC16
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR100272
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_52533 | k141_52533_2 | 246 | 1328 | + | GT2 |
| NULL(UNKNOWN) | k141_52533 | k141_52533_3 | 1408 | 1908 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_52533 | k141_52533_4 | 2380 | 3396 | - | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd |
| CAZyme | k141_52533 | k141_52533_5 | 3695 | 4843 | - | CE9 |
| pfam | k141_52533 | k141_52533_6 | 4914 | 5651 | - | NTP_transferase | NTP_transf_3 |
| pfam | k141_52533 | k141_52533_7 | 5908 | 7023 | - | GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg |
| TC | k141_52533 | k141_52533_8 | 7519 | 8460 | - | 9.B.34.1.3 |
| pfam | k141_52533 | k141_52533_9 | 9208 | 9918 | + | Glucosamine_iso |
| CAZyme | k141_52533 | k141_52533_10 | 10101 | 11234 | - | GH88 |
| TC | k141_52533 | k141_52533_11 | 11431 | 12108 | - | 3.A.1.122.2 |
| NULL(UNKNOWN) | k141_52533 | k141_52533_12 | 12123 | 12656 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_52533 | k141_52533_13 | 12695 | 13741 | - | 3.A.1.122.12 |
Gene ID: k141_52533_2
Type: CAZyme
Location: 246 - 1328 (+)
Type: CAZyme
Location: 246 - 1328 (+)
Gene ID: k141_52533_3
Type:
Location: 1408 - 1908 (+)
Type:
Location: 1408 - 1908 (+)
Gene ID: k141_52533_4
Type: pfam
Location: 2380 - 3396 (-)
Type: pfam
Location: 2380 - 3396 (-)
Gene ID: k141_52533_5
Type: CAZyme
Location: 3695 - 4843 (-)
Type: CAZyme
Location: 3695 - 4843 (-)
Gene ID: k141_52533_6
Type: pfam
Location: 4914 - 5651 (-)
Type: pfam
Location: 4914 - 5651 (-)
Gene ID: k141_52533_7
Type: pfam
Location: 5908 - 7023 (-)
Type: pfam
Location: 5908 - 7023 (-)
Gene ID: k141_52533_8
Type: TC
Location: 7519 - 8460 (-)
Type: TC
Location: 7519 - 8460 (-)
Gene ID: k141_52533_9
Type: pfam
Location: 9208 - 9918 (+)
Type: pfam
Location: 9208 - 9918 (+)
Gene ID: k141_52533_10
Type: CAZyme
Location: 10101 - 11234 (-)
Type: CAZyme
Location: 10101 - 11234 (-)
Gene ID: k141_52533_11
Type: TC
Location: 11431 - 12108 (-)
Type: TC
Location: 11431 - 12108 (-)
Gene ID: k141_52533_12
Type:
Location: 12123 - 12656 (-)
Type:
Location: 12123 - 12656 (-)
Gene ID: k141_52533_13
Type: TC
Location: 12695 - 13741 (-)
Type: TC
Location: 12695 - 13741 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.