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Cluster: CGMR100272_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_7899 k141_7899_11 13069 14808 + 9.B.33.1.2
TF k141_7899 k141_7899_12 14796 16370 + HTH_AraC | HTH_AraC
STP k141_7899 k141_7899_13 16767 17930 + SBP_bac_1
TC k141_7899 k141_7899_14 17971 18876 + 3.A.1.1.7
TC k141_7899 k141_7899_15 18896 19750 + 3.A.1.1.11
NULL(UNKNOWN) k141_7899 k141_7899_16 19839 21620 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_7899 k141_7899_17 21624 23612 + PL17_1
CAZyme k141_7899 k141_7899_18 23740 25230 + CBM91 | GH43_12
pfam k141_7899 k141_7899_19 25235 26065 + AP_endonuc_2
TC k141_7899 k141_7899_20 26209 27567 - 2.A.66.1.45
Gene ID: k141_7899_11
Type: TC
Location: 13069 - 14808 (+)
Gene ID: k141_7899_12
Type: TF
Location: 14796 - 16370 (+)
Gene ID: k141_7899_13
Type: STP
Location: 16767 - 17930 (+)
Gene ID: k141_7899_14
Type: TC
Location: 17971 - 18876 (+)
Gene ID: k141_7899_15
Type: TC
Location: 18896 - 19750 (+)
Gene ID: k141_7899_16
Type:
Location: 19839 - 21620 (+)
Gene ID: k141_7899_17
Type: CAZyme
Location: 21624 - 23612 (+)
Gene ID: k141_7899_18
Type: CAZyme
Location: 23740 - 25230 (+)
Gene ID: k141_7899_19
Type: pfam
Location: 25235 - 26065 (+)
Gene ID: k141_7899_20
Type: TC
Location: 26209 - 27567 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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