Cluster: CGMR100272_CGC12
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100272
- CGC Family ID: CGCFAM_00133
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_48641 | k141_48641_10 | 12942 | 14045 | - | GH105 |
| NULL(UNKNOWN) | k141_48641 | k141_48641_11 | 14076 | 15869 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_48641 | k141_48641_12 | 15929 | 17317 | - | 2.A.66.1.33 |
| NULL(UNKNOWN) | k141_48641 | k141_48641_13 | 17478 | 19235 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_48641 | k141_48641_14 | 19359 | 20861 | - | SBP_bac_1 |
| TC | k141_48641 | k141_48641_15 | 20907 | 21755 | - | 3.A.1.1.29 |
| TC | k141_48641 | k141_48641_16 | 21769 | 22710 | - | 3.A.1.1.10 |
| TC | k141_48641 | k141_48641_17 | 22941 | 24749 | + | 8.A.59.2.1 |
Gene ID: k141_48641_10
Type: CAZyme
Location: 12942 - 14045 (-)
Type: CAZyme
Location: 12942 - 14045 (-)
Gene ID: k141_48641_11
Type:
Location: 14076 - 15869 (-)
Type:
Location: 14076 - 15869 (-)
Gene ID: k141_48641_12
Type: TC
Location: 15929 - 17317 (-)
Type: TC
Location: 15929 - 17317 (-)
Gene ID: k141_48641_13
Type:
Location: 17478 - 19235 (-)
Type:
Location: 17478 - 19235 (-)
Gene ID: k141_48641_14
Type: STP
Location: 19359 - 20861 (-)
Type: STP
Location: 19359 - 20861 (-)
Gene ID: k141_48641_15
Type: TC
Location: 20907 - 21755 (-)
Type: TC
Location: 20907 - 21755 (-)
Gene ID: k141_48641_16
Type: TC
Location: 21769 - 22710 (-)
Type: TC
Location: 21769 - 22710 (-)
Gene ID: k141_48641_17
Type: TC
Location: 22941 - 24749 (+)
Type: TC
Location: 22941 - 24749 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.