Cluster: CGMR100179_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100179
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_78110 | k141_78110_14 | 9431 | 10252 | + | 3.A.1.104.1 |
| TC | k141_78110 | k141_78110_15 | 10262 | 11089 | + | 3.A.1.104.2 |
| pfam | k141_78110 | k141_78110_16 | 11099 | 11485 | + | CTP_transf_like |
| CAZyme | k141_78110 | k141_78110_17 | 11486 | 13702 | + | GT2 |
Gene ID: k141_78110_14
Type: TC
Location: 9431 - 10252 (+)
Type: TC
Location: 9431 - 10252 (+)
Gene ID: k141_78110_15
Type: TC
Location: 10262 - 11089 (+)
Type: TC
Location: 10262 - 11089 (+)
Gene ID: k141_78110_16
Type: pfam
Location: 11099 - 11485 (+)
Type: pfam
Location: 11099 - 11485 (+)
Gene ID: k141_78110_17
Type: CAZyme
Location: 11486 - 13702 (+)
Type: CAZyme
Location: 11486 - 13702 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia spiroformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_78110_14 | vegan > omnivore | 5.07206 | 0.00186 |
| k141_78110_15 | vegan > omnivore | 3.39801 | 0.00186 |