Cluster: CGMR100179_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR100179
- CGC Family ID: CGCFAM_03195
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_80060 | k141_80060_9 | 9720 | 10586 | + | GT2 |
| pfam | k141_80060 | k141_80060_10 | 10779 | 11945 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | k141_80060 | k141_80060_11 | 11957 | 13000 | + | 9.B.18.2.1 |
| CAZyme | k141_80060 | k141_80060_12 | 13002 | 14051 | + | GT2 |
Gene ID: k141_80060_9
Type: CAZyme
Location: 9720 - 10586 (+)
Type: CAZyme
Location: 9720 - 10586 (+)
Gene ID: k141_80060_10
Type: pfam
Location: 10779 - 11945 (+)
Type: pfam
Location: 10779 - 11945 (+)
Gene ID: k141_80060_11
Type: TC
Location: 11957 - 13000 (+)
Type: TC
Location: 11957 - 13000 (+)
Gene ID: k141_80060_12
Type: CAZyme
Location: 13002 - 14051 (+)
Type: CAZyme
Location: 13002 - 14051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia spiroformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.