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Cluster: CGMR100179_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_77071 k141_77071_2 872 2236 + 9.B.18.1.2
pfam k141_77071 k141_77071_3 2303 3940 + DUF2142
CAZyme k141_77071 k141_77071_4 4031 7465 + GH25 | GH73
CAZyme k141_77071 k141_77071_5 7686 8408 + GT2
pfam k141_77071 k141_77071_6 8405 8761 + DUF2304
CAZyme k141_77071 k141_77071_7 8754 9719 + GT2
pfam k141_77071 k141_77071_8 9744 10544 + Glycos_transf_2
CAZyme k141_77071 k141_77071_9 10546 11697 + GT4
CAZyme k141_77071 k141_77071_10 11712 12482 + GT111
pfam k141_77071 k141_77071_11 12495 13601 + Amino_oxidase | GLF | NAD_binding_8
TC k141_77071 k141_77071_12 13604 15046 + 2.A.66.2.16
TC k141_77071 k141_77071_13 15214 16347 + 3.A.1.103.4
TC k141_77071 k141_77071_14 16358 17131 + 3.A.1.103.4
CAZyme k141_77071 k141_77071_15 17155 19341 + GT2 | GT2
pfam k141_77071 k141_77071_16 19470 21668 + DUF2142
pfam k141_77071 k141_77071_17 21702 22544 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme k141_77071 k141_77071_18 22726 23508 + GT2
CAZyme k141_77071 k141_77071_19 23520 24479 + GT2
CAZyme k141_77071 k141_77071_20 24494 25444 + GT2
CAZyme k141_77071 k141_77071_21 25446 26294 + GT2
NULL(UNKNOWN) k141_77071 k141_77071_22 26364 27074 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_77071 k141_77071_23 27131 28291 + GT4
Gene ID: k141_77071_2
Type: TC
Location: 872 - 2236 (+)
Gene ID: k141_77071_3
Type: pfam
Location: 2303 - 3940 (+)
Gene ID: k141_77071_4
Type: CAZyme
Location: 4031 - 7465 (+)
Gene ID: k141_77071_5
Type: CAZyme
Location: 7686 - 8408 (+)
Gene ID: k141_77071_6
Type: pfam
Location: 8405 - 8761 (+)
Gene ID: k141_77071_7
Type: CAZyme
Location: 8754 - 9719 (+)
Gene ID: k141_77071_8
Type: pfam
Location: 9744 - 10544 (+)
Gene ID: k141_77071_9
Type: CAZyme
Location: 10546 - 11697 (+)
Gene ID: k141_77071_10
Type: CAZyme
Location: 11712 - 12482 (+)
Gene ID: k141_77071_11
Type: pfam
Location: 12495 - 13601 (+)
Gene ID: k141_77071_12
Type: TC
Location: 13604 - 15046 (+)
Gene ID: k141_77071_13
Type: TC
Location: 15214 - 16347 (+)
Gene ID: k141_77071_14
Type: TC
Location: 16358 - 17131 (+)
Gene ID: k141_77071_15
Type: CAZyme
Location: 17155 - 19341 (+)
Gene ID: k141_77071_16
Type: pfam
Location: 19470 - 21668 (+)
Gene ID: k141_77071_17
Type: pfam
Location: 21702 - 22544 (+)
Gene ID: k141_77071_18
Type: CAZyme
Location: 22726 - 23508 (+)
Gene ID: k141_77071_19
Type: CAZyme
Location: 23520 - 24479 (+)
Gene ID: k141_77071_20
Type: CAZyme
Location: 24494 - 25444 (+)
Gene ID: k141_77071_21
Type: CAZyme
Location: 25446 - 26294 (+)
Gene ID: k141_77071_22
Type:
Location: 26364 - 27074 (+)
Gene ID: k141_77071_23
Type: CAZyme
Location: 27131 - 28291 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_77071_13 vegan > omnivore 1.12546 0.00186
k141_77071_14 vegan > omnivore 3.37206 0.00186

🧭 Explore Read Mapping of CGC

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