Cluster: CGMR100179_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100179
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_59085 | k141_59085_12 | 17567 | 24250 | + | CBM32 | GH31_18 |
| NULL(UNKNOWN) | k141_59085 | k141_59085_13 | 24397 | 24633 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_59085 | k141_59085_14 | 25053 | 25535 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_59085 | k141_59085_15 | 25831 | 26652 | + | 2.A.119.2.1 |
| pfam | k141_59085 | k141_59085_16 | 26752 | 27717 | + | Ldh_1_N | Ldh_1_C |
| pfam | k141_59085 | k141_59085_17 | 27831 | 28643 | + | Amidase_3 |
| TC | k141_59085 | k141_59085_18 | 28676 | 30154 | + | 9.B.174.1.1 |
Gene ID: k141_59085_12
Type: CAZyme
Location: 17567 - 24250 (+)
Type: CAZyme
Location: 17567 - 24250 (+)
Gene ID: k141_59085_13
Type:
Location: 24397 - 24633 (+)
Type:
Location: 24397 - 24633 (+)
Gene ID: k141_59085_14
Type:
Location: 25053 - 25535 (+)
Type:
Location: 25053 - 25535 (+)
Gene ID: k141_59085_15
Type: TC
Location: 25831 - 26652 (+)
Type: TC
Location: 25831 - 26652 (+)
Gene ID: k141_59085_16
Type: pfam
Location: 26752 - 27717 (+)
Type: pfam
Location: 26752 - 27717 (+)
Gene ID: k141_59085_17
Type: pfam
Location: 27831 - 28643 (+)
Type: pfam
Location: 27831 - 28643 (+)
Gene ID: k141_59085_18
Type: TC
Location: 28676 - 30154 (+)
Type: TC
Location: 28676 - 30154 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia spiroformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.