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Cluster: CGMR100179_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_62846 k141_62846_12 10383 11297 - 4.A.6.1.4
TC k141_62846 k141_62846_13 11287 12108 - 4.A.6.1.4
TC k141_62846 k141_62846_14 12151 12627 - 4.A.6.1.4
TC k141_62846 k141_62846_15 13338 13796 + 2.A.88.9.2
pfam k141_62846 k141_62846_16 13942 17160 - MGS | ATP-grasp | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C | Dala_Dala_lig_C | ATPgrasp_Ter
pfam k141_62846 k141_62846_17 17434 17901 + DUF1003
CAZyme k141_62846 k141_62846_18 17947 18795 + GH25
Gene ID: k141_62846_12
Type: TC
Location: 10383 - 11297 (-)
Gene ID: k141_62846_13
Type: TC
Location: 11287 - 12108 (-)
Gene ID: k141_62846_14
Type: TC
Location: 12151 - 12627 (-)
Gene ID: k141_62846_15
Type: TC
Location: 13338 - 13796 (+)
Gene ID: k141_62846_16
Type: pfam
Location: 13942 - 17160 (-)
Gene ID: k141_62846_17
Type: pfam
Location: 17434 - 17901 (+)
Gene ID: k141_62846_18
Type: CAZyme
Location: 17947 - 18795 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_62846_16 vegan > omnivore 1.32358 0.00186

🧭 Explore Read Mapping of CGC

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