Cluster: CGMR100179_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100179
- CGC Family ID: CGCFAM_00326
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_35151 | k141_35151_34 | 41406 | 42320 | - | 8.A.21.2.2 |
| pfam | k141_35151 | k141_35151_35 | 42334 | 42759 | - | NfeD |
| NULL(UNKNOWN) | k141_35151 | k141_35151_36 | 42774 | 43139 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_35151 | k141_35151_37 | 43388 | 49069 | + | CBM32 |
Gene ID: k141_35151_34
Type: TC
Location: 41406 - 42320 (-)
Type: TC
Location: 41406 - 42320 (-)
Gene ID: k141_35151_35
Type: pfam
Location: 42334 - 42759 (-)
Type: pfam
Location: 42334 - 42759 (-)
Gene ID: k141_35151_36
Type:
Location: 42774 - 43139 (-)
Type:
Location: 42774 - 43139 (-)
Gene ID: k141_35151_37
Type: CAZyme
Location: 43388 - 49069 (+)
Type: CAZyme
Location: 43388 - 49069 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia spiroformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_35151_34 | vegan > omnivore | 1.66237 | 0.00186 |