Cluster: CGMR100179_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR100179
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_8969 | k141_8969_2 | 304 | 5907 | + | GH92 |
| TC | k141_8969 | k141_8969_3 | 6620 | 6925 | - | 4.A.2.1.10 |
| TC | k141_8969 | k141_8969_4 | 6949 | 8016 | - | 4.A.2.1.10 |
| pfam | k141_8969 | k141_8969_5 | 8081 | 8530 | - | PTS_EIIA_2 |
| TF | k141_8969 | k141_8969_6 | 8533 | 10560 | - | Mga |
| TC | k141_8969 | k141_8969_7 | 10873 | 10998 | + | 4.A.6.1.15 |
Gene ID: k141_8969_2
Type: CAZyme
Location: 304 - 5907 (+)
Type: CAZyme
Location: 304 - 5907 (+)
Gene ID: k141_8969_3
Type: TC
Location: 6620 - 6925 (-)
Type: TC
Location: 6620 - 6925 (-)
Gene ID: k141_8969_4
Type: TC
Location: 6949 - 8016 (-)
Type: TC
Location: 6949 - 8016 (-)
Gene ID: k141_8969_5
Type: pfam
Location: 8081 - 8530 (-)
Type: pfam
Location: 8081 - 8530 (-)
Gene ID: k141_8969_6
Type: TF
Location: 8533 - 10560 (-)
Type: TF
Location: 8533 - 10560 (-)
Gene ID: k141_8969_7
Type: TC
Location: 10873 - 10998 (+)
Type: TC
Location: 10873 - 10998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia spiroformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.