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Cluster: CGMR099992_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_515678 k141_515678_29 34161 34727 + 2.A.51.1.6
TC k141_515678 k141_515678_30 34724 35272 + 2.A.51.1.6
pfam k141_515678 k141_515678_31 35275 36567 + Mur_ligase_C | Mur_ligase_M
TF k141_515678 k141_515678_32 36581 36934 - MerR
TC k141_515678 k141_515678_33 36948 37904 - 1.A.34.1.3
pfam k141_515678 k141_515678_34 38115 40739 + tRNA-synt_2c | DHHA1 | tRNA_SAD
TC k141_515678 k141_515678_35 41085 42353 - 3.D.5.1.1
TC k141_515678 k141_515678_36 42380 43003 - 3.D.5.1.1
TC k141_515678 k141_515678_37 43025 43639 - 3.D.5.1.1
TC k141_515678 k141_515678_38 43653 44357 - 3.D.5.1.1
TC k141_515678 k141_515678_39 44373 45584 - 3.D.5.1.1
TC k141_515678 k141_515678_40 45620 46963 - 3.D.5.1.1
NULL(UNKNOWN) k141_515678 k141_515678_41 47291 47977 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_515678 k141_515678_42 48005 51112 + GH2
NULL(UNKNOWN) k141_515678 k141_515678_43 51237 51770 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_515678 k141_515678_44 52136 53518 - 1.B.17.3.5
TC k141_515678 k141_515678_45 53531 56659 - 2.A.6.2.22
TC k141_515678 k141_515678_46 56663 57781 - 2.A.6.2.44
Gene ID: k141_515678_29
Type: TC
Location: 34161 - 34727 (+)
Gene ID: k141_515678_30
Type: TC
Location: 34724 - 35272 (+)
Gene ID: k141_515678_31
Type: pfam
Location: 35275 - 36567 (+)
Gene ID: k141_515678_32
Type: TF
Location: 36581 - 36934 (-)
Gene ID: k141_515678_33
Type: TC
Location: 36948 - 37904 (-)
Gene ID: k141_515678_34
Type: pfam
Location: 38115 - 40739 (+)
Gene ID: k141_515678_35
Type: TC
Location: 41085 - 42353 (-)
Gene ID: k141_515678_36
Type: TC
Location: 42380 - 43003 (-)
Gene ID: k141_515678_37
Type: TC
Location: 43025 - 43639 (-)
Gene ID: k141_515678_38
Type: TC
Location: 43653 - 44357 (-)
Gene ID: k141_515678_39
Type: TC
Location: 44373 - 45584 (-)
Gene ID: k141_515678_40
Type: TC
Location: 45620 - 46963 (-)
Gene ID: k141_515678_41
Type:
Location: 47291 - 47977 (+)
Gene ID: k141_515678_42
Type: CAZyme
Location: 48005 - 51112 (+)
Gene ID: k141_515678_43
Type:
Location: 51237 - 51770 (-)
Gene ID: k141_515678_44
Type: TC
Location: 52136 - 53518 (-)
Gene ID: k141_515678_45
Type: TC
Location: 53531 - 56659 (-)
Gene ID: k141_515678_46
Type: TC
Location: 56663 - 57781 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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