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Cluster: CGMR099959_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_242458 k141_242458_25 26224 27342 + GT2
pfam k141_242458 k141_242458_26 27344 27838 + CrtO
TC k141_242458 k141_242458_27 27900 28856 + 8.A.5.1.4
pfam k141_242458 k141_242458_28 28973 31114 + UvrD-helicase | Viral_helicase1 | AAA_19 | UvrD_C | UvrD_C_2
STP k141_242458 k141_242458_29 31273 31890 + TetR_N
TC k141_242458 k141_242458_30 31950 33722 + 3.A.1.21.1
TC k141_242458 k141_242458_31 33710 35437 + 3.A.1.21.1
NULL(UNKNOWN) k141_242458 k141_242458_32 35464 35970 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_242458 k141_242458_33 36165 37115 + HTH_AraC
TC k141_242458 k141_242458_34 37210 38997 + 3.A.1.21.1
TC k141_242458 k141_242458_35 38994 40739 + 3.A.1.21.1
Gene ID: k141_242458_25
Type: CAZyme
Location: 26224 - 27342 (+)
Gene ID: k141_242458_26
Type: pfam
Location: 27344 - 27838 (+)
Gene ID: k141_242458_27
Type: TC
Location: 27900 - 28856 (+)
Gene ID: k141_242458_28
Type: pfam
Location: 28973 - 31114 (+)
Gene ID: k141_242458_29
Type: STP
Location: 31273 - 31890 (+)
Gene ID: k141_242458_30
Type: TC
Location: 31950 - 33722 (+)
Gene ID: k141_242458_31
Type: TC
Location: 33710 - 35437 (+)
Gene ID: k141_242458_32
Type:
Location: 35464 - 35970 (+)
Gene ID: k141_242458_33
Type: TF
Location: 36165 - 37115 (+)
Gene ID: k141_242458_34
Type: TC
Location: 37210 - 38997 (+)
Gene ID: k141_242458_35
Type: TC
Location: 38994 - 40739 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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