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Cluster: CGMR099959_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_199007 k141_199007_1 2 1900 + 9.B.74.1.3
TC k141_199007 k141_199007_2 2118 3170 + 2.A.20.1.7
pfam k141_199007 k141_199007_3 3208 3831 + PhoU_div
CAZyme k141_199007 k141_199007_4 3939 5447 - GH32
pfam k141_199007 k141_199007_5 5475 6965 - FGGY_N | FGGY_C
TC k141_199007 k141_199007_6 7029 8024 - 3.A.1.2.15
TC k141_199007 k141_199007_7 8047 9537 - 3.A.1.2.20
STP k141_199007 k141_199007_8 9690 10700 - Peripla_BP_1
pfam k141_199007 k141_199007_9 10946 12166 - ROK
CAZyme k141_199007 k141_199007_10 12600 14069 + GH32
Gene ID: k141_199007_1
Type: TC
Location: 2 - 1900 (+)
Gene ID: k141_199007_2
Type: TC
Location: 2118 - 3170 (+)
Gene ID: k141_199007_3
Type: pfam
Location: 3208 - 3831 (+)
Gene ID: k141_199007_4
Type: CAZyme
Location: 3939 - 5447 (-)
Gene ID: k141_199007_5
Type: pfam
Location: 5475 - 6965 (-)
Gene ID: k141_199007_6
Type: TC
Location: 7029 - 8024 (-)
Gene ID: k141_199007_7
Type: TC
Location: 8047 - 9537 (-)
Gene ID: k141_199007_8
Type: STP
Location: 9690 - 10700 (-)
Gene ID: k141_199007_9
Type: pfam
Location: 10946 - 12166 (-)
Gene ID: k141_199007_10
Type: CAZyme
Location: 12600 - 14069 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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