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Cluster: CGMR099959_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_58641 k141_58641_2 687 2192 + 3.A.1.2.20
TC k141_58641 k141_58641_3 2189 3163 + 3.A.1.2.1
STP k141_58641 k141_58641_4 3178 3585 + AraC_binding
TC k141_58641 k141_58641_5 3604 4629 + 3.A.1.2.6
pfam k141_58641 k141_58641_6 4681 6162 - UPF0020 | MTS
CAZyme k141_58641 k141_58641_7 6159 7220 - GT28
CAZyme k141_58641 k141_58641_8 7486 8595 + GT28
STP k141_58641 k141_58641_9 8680 9372 + Peptidase_M23
peptidase k141_58641 k141_58641_10 9435 10136 - S09.UPW
TC k141_58641 k141_58641_11 10202 10855 - 1.A.62.3.1
Gene ID: k141_58641_2
Type: TC
Location: 687 - 2192 (+)
Gene ID: k141_58641_3
Type: TC
Location: 2189 - 3163 (+)
Gene ID: k141_58641_4
Type: STP
Location: 3178 - 3585 (+)
Gene ID: k141_58641_5
Type: TC
Location: 3604 - 4629 (+)
Gene ID: k141_58641_6
Type: pfam
Location: 4681 - 6162 (-)
Gene ID: k141_58641_7
Type: CAZyme
Location: 6159 - 7220 (-)
Gene ID: k141_58641_8
Type: CAZyme
Location: 7486 - 8595 (+)
Gene ID: k141_58641_9
Type: STP
Location: 8680 - 9372 (+)
Gene ID: k141_58641_10
Type: peptidase
Location: 9435 - 10136 (-)
Gene ID: k141_58641_11
Type: TC
Location: 10202 - 10855 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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