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Cluster: CGMR099914_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_89759 k141_89759_3 2541 3710 + 2.A.1.17.3
CAZyme k141_89759 k141_89759_4 3796 4941 - CBM50
TC k141_89759 k141_89759_5 5322 5945 - 3.A.2.2.2
TC k141_89759 k141_89759_6 5949 7334 - 3.A.2.2.2
TC k141_89759 k141_89759_7 7321 9111 - 3.A.2.2.2
pfam k141_89759 k141_89759_8 9145 9849 - Acetyltransf_1 | Acetyltransf_3
TC k141_89759 k141_89759_9 9846 10166 - 3.A.2.2.2
TC k141_89759 k141_89759_10 10147 11166 - 3.A.2.2.2
NULL(UNKNOWN) k141_89759 k141_89759_11 11176 11766 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_89759 k141_89759_12 11836 12315 - 3.A.2.2.2
TC k141_89759 k141_89759_13 12346 14307 - 3.A.2.2.2
Gene ID: k141_89759_3
Type: TC
Location: 2541 - 3710 (+)
Gene ID: k141_89759_4
Type: CAZyme
Location: 3796 - 4941 (-)
Gene ID: k141_89759_5
Type: TC
Location: 5322 - 5945 (-)
Gene ID: k141_89759_6
Type: TC
Location: 5949 - 7334 (-)
Gene ID: k141_89759_7
Type: TC
Location: 7321 - 9111 (-)
Gene ID: k141_89759_8
Type: pfam
Location: 9145 - 9849 (-)
Gene ID: k141_89759_9
Type: TC
Location: 9846 - 10166 (-)
Gene ID: k141_89759_10
Type: TC
Location: 10147 - 11166 (-)
Gene ID: k141_89759_11
Type:
Location: 11176 - 11766 (-)
Gene ID: k141_89759_12
Type: TC
Location: 11836 - 12315 (-)
Gene ID: k141_89759_13
Type: TC
Location: 12346 - 14307 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_89759_8 vegan > omnivore 2.91451 0.00918
k141_89759_8 vegetarian > omnivore 3.18988 0.00340
k141_89759_12 vegan > omnivore 1.36842 0.00918

🧭 Explore Read Mapping of CGC

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