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Cluster: CGMR099914_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_30339 k141_30339_2 728 1510 + GT2
CAZyme k141_30339 k141_30339_3 1609 2583 + GT2
CAZyme k141_30339 k141_30339_4 2640 3566 + GT2
pfam k141_30339 k141_30339_5 3632 4483 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme k141_30339 k141_30339_6 4591 5739 + GT4
CAZyme k141_30339 k141_30339_7 5736 6677 + GT2
pfam k141_30339 k141_30339_8 6677 7483 + ABC2_membrane
TC k141_30339 k141_30339_9 7483 8706 + 3.A.1.103.5
CAZyme k141_30339 k141_30339_10 8719 10068 + GT2
Gene ID: k141_30339_2
Type: CAZyme
Location: 728 - 1510 (+)
Gene ID: k141_30339_3
Type: CAZyme
Location: 1609 - 2583 (+)
Gene ID: k141_30339_4
Type: CAZyme
Location: 2640 - 3566 (+)
Gene ID: k141_30339_5
Type: pfam
Location: 3632 - 4483 (+)
Gene ID: k141_30339_6
Type: CAZyme
Location: 4591 - 5739 (+)
Gene ID: k141_30339_7
Type: CAZyme
Location: 5736 - 6677 (+)
Gene ID: k141_30339_8
Type: pfam
Location: 6677 - 7483 (+)
Gene ID: k141_30339_9
Type: TC
Location: 7483 - 8706 (+)
Gene ID: k141_30339_10
Type: CAZyme
Location: 8719 - 10068 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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