Cluster: CGMR099914_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR099914
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_83305 | k141_83305_2 | 1309 | 2343 | + | GT4 |
| CAZyme | k141_83305 | k141_83305_3 | 2345 | 3667 | + | GT4 |
| pfam | k141_83305 | k141_83305_4 | 4021 | 5964 | + | tRNA-synt_2b | TGS | HGTP_anticodon | tRNA_SAD |
| TC | k141_83305 | k141_83305_5 | 6176 | 7225 | - | 9.B.145.1.2 |
| TF | k141_83305 | k141_83305_6 | 7726 | 8427 | + | Trans_reg_C |
| TC | k141_83305 | k141_83305_7 | 8420 | 9772 | + | 2.A.21.9.1 |
Gene ID: k141_83305_2
Type: CAZyme
Location: 1309 - 2343 (+)
Type: CAZyme
Location: 1309 - 2343 (+)
Gene ID: k141_83305_3
Type: CAZyme
Location: 2345 - 3667 (+)
Type: CAZyme
Location: 2345 - 3667 (+)
Gene ID: k141_83305_4
Type: pfam
Location: 4021 - 5964 (+)
Type: pfam
Location: 4021 - 5964 (+)
Gene ID: k141_83305_5
Type: TC
Location: 6176 - 7225 (-)
Type: TC
Location: 6176 - 7225 (-)
Gene ID: k141_83305_6
Type: TF
Location: 7726 - 8427 (+)
Type: TF
Location: 7726 - 8427 (+)
Gene ID: k141_83305_7
Type: TC
Location: 8420 - 9772 (+)
Type: TC
Location: 8420 - 9772 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_83305_5 | vegan > omnivore | 1.65914 | 0.00918 |
| k141_83305_5 | vegetarian > omnivore | 2.80482 | 0.00340 |