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Cluster: CGMR099770_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_19428 k141_19428_1 3 323 + 3.B.1.1.3
TC k141_19428 k141_19428_2 365 1642 + 3.B.1.1.3
TC k141_19428 k141_19428_3 1672 3069 + 3.B.1.1.6
TC k141_19428 k141_19428_4 3154 4143 - 8.A.5.1.3
STP k141_19428 k141_19428_5 4165 5148 - Peripla_BP_1
TC k141_19428 k141_19428_6 5123 6880 - 8.A.59.2.1
TF k141_19428 k141_19428_7 6881 8494 - HTH_AraC
pfam k141_19428 k141_19428_8 8636 8995 - Flg_new
TC k141_19428 k141_19428_9 9018 10103 - 3.A.1.2.3
TC k141_19428 k141_19428_10 10136 11677 - 3.A.1.2.3
TC k141_19428 k141_19428_11 11721 12824 - 3.A.1.2.3
TC k141_19428 k141_19428_12 13034 13969 + 3.A.5.1.1
TC k141_19428 k141_19428_13 14012 14659 - 1.A.16.5.2
CAZyme k141_19428 k141_19428_14 14863 15708 + GH130_1
Gene ID: k141_19428_1
Type: TC
Location: 3 - 323 (+)
Gene ID: k141_19428_2
Type: TC
Location: 365 - 1642 (+)
Gene ID: k141_19428_3
Type: TC
Location: 1672 - 3069 (+)
Gene ID: k141_19428_4
Type: TC
Location: 3154 - 4143 (-)
Gene ID: k141_19428_5
Type: STP
Location: 4165 - 5148 (-)
Gene ID: k141_19428_6
Type: TC
Location: 5123 - 6880 (-)
Gene ID: k141_19428_7
Type: TF
Location: 6881 - 8494 (-)
Gene ID: k141_19428_8
Type: pfam
Location: 8636 - 8995 (-)
Gene ID: k141_19428_9
Type: TC
Location: 9018 - 10103 (-)
Gene ID: k141_19428_10
Type: TC
Location: 10136 - 11677 (-)
Gene ID: k141_19428_11
Type: TC
Location: 11721 - 12824 (-)
Gene ID: k141_19428_12
Type: TC
Location: 13034 - 13969 (+)
Gene ID: k141_19428_13
Type: TC
Location: 14012 - 14659 (-)
Gene ID: k141_19428_14
Type: CAZyme
Location: 14863 - 15708 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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