Cluster: CGMR099770_CGC11
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR099770
- CGC Family ID: CGCFAM_07026
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_325885 | k141_325885_14 | 14089 | 15441 | - | GH30_3 |
| TF | k141_325885 | k141_325885_15 | 15595 | 16377 | + | HTH_AraC | HTH_AraC |
| TF | k141_325885 | k141_325885_16 | 16418 | 17989 | - | HTH_AraC | HTH_AraC |
| TC | k141_325885 | k141_325885_17 | 18008 | 19789 | - | 9.B.33.1.1 |
| NULL(UNKNOWN) | k141_325885 | k141_325885_18 | 20002 | 21066 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_325885 | k141_325885_19 | 21132 | 22652 | + | SBP_bac_1 | DUF3502 | SBP_bac_8 |
| TC | k141_325885 | k141_325885_20 | 22689 | 23639 | + | 3.A.1.1.10 |
| TC | k141_325885 | k141_325885_21 | 23655 | 24539 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | k141_325885 | k141_325885_22 | 24660 | 26798 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_325885 | k141_325885_23 | 26876 | 29179 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_325885 | k141_325885_24 | 29195 | 31924 | + | CBM32 | CBM85 | GH10 |
| pfam | k141_325885 | k141_325885_25 | 31953 | 33617 | + | SLH | SLH | SLH |
| NULL(UNKNOWN) | k141_325885 | k141_325885_26 | 33653 | 36349 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_325885 | k141_325885_27 | 36364 | 37329 | + | GH130_9 |
Gene ID: k141_325885_14
Type: CAZyme
Location: 14089 - 15441 (-)
Type: CAZyme
Location: 14089 - 15441 (-)
Gene ID: k141_325885_15
Type: TF
Location: 15595 - 16377 (+)
Type: TF
Location: 15595 - 16377 (+)
Gene ID: k141_325885_16
Type: TF
Location: 16418 - 17989 (-)
Type: TF
Location: 16418 - 17989 (-)
Gene ID: k141_325885_17
Type: TC
Location: 18008 - 19789 (-)
Type: TC
Location: 18008 - 19789 (-)
Gene ID: k141_325885_18
Type:
Location: 20002 - 21066 (+)
Type:
Location: 20002 - 21066 (+)
Gene ID: k141_325885_19
Type: pfam
Location: 21132 - 22652 (+)
Type: pfam
Location: 21132 - 22652 (+)
Gene ID: k141_325885_20
Type: TC
Location: 22689 - 23639 (+)
Type: TC
Location: 22689 - 23639 (+)
Gene ID: k141_325885_21
Type: TC
Location: 23655 - 24539 (+)
Type: TC
Location: 23655 - 24539 (+)
Gene ID: k141_325885_22
Type:
Location: 24660 - 26798 (+)
Type:
Location: 24660 - 26798 (+)
Gene ID: k141_325885_23
Type:
Location: 26876 - 29179 (+)
Type:
Location: 26876 - 29179 (+)
Gene ID: k141_325885_24
Type: CAZyme
Location: 29195 - 31924 (+)
Type: CAZyme
Location: 29195 - 31924 (+)
Gene ID: k141_325885_25
Type: pfam
Location: 31953 - 33617 (+)
Type: pfam
Location: 31953 - 33617 (+)
Gene ID: k141_325885_26
Type:
Location: 33653 - 36349 (+)
Type:
Location: 33653 - 36349 (+)
Gene ID: k141_325885_27
Type: CAZyme
Location: 36364 - 37329 (+)
Type: CAZyme
Location: 36364 - 37329 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
UMGS1820
Species
UMGS1820 sp900555375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.