Cluster: CGMR099606_CGC6
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR099606
- CGC Family ID: CGCFAM_02801
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_119514 | k141_119514_3 | 1411 | 3462 | - | GH3 |
| CAZyme | k141_119514 | k141_119514_4 | 3602 | 6850 | - | CE17 |
| CAZyme | k141_119514 | k141_119514_5 | 6913 | 9141 | - | GH141 |
| pfam | k141_119514 | k141_119514_6 | 9179 | 11755 | - | SLH |
| pfam | k141_119514 | k141_119514_7 | 11772 | 13691 | - | SLH | SLH | SLH |
| CAZyme | k141_119514 | k141_119514_8 | 13740 | 16868 | - | GH141 |
| pfam | k141_119514 | k141_119514_9 | 16878 | 18140 | - | Big_5 |
| STP | k141_119514 | k141_119514_10 | 18153 | 19604 | - | SBP_bac_1 |
| TC | k141_119514 | k141_119514_11 | 19670 | 20548 | - | 3.A.1.1.29 |
| TC | k141_119514 | k141_119514_12 | 20570 | 21520 | - | 3.A.1.1.29 |
| TF | k141_119514 | k141_119514_13 | 21828 | 23270 | + | HTH_AraC | HTH_AraC |
| TC | k141_119514 | k141_119514_14 | 23296 | 24999 | + | 8.A.59.2.1 |
| pfam | k141_119514 | k141_119514_15 | 25280 | 25924 | + | LUD_dom |
| TC | k141_119514 | k141_119514_16 | 25968 | 27728 | + | 2.A.58.2.2 |
Gene ID: k141_119514_3
Type: CAZyme
Location: 1411 - 3462 (-)
Type: CAZyme
Location: 1411 - 3462 (-)
Gene ID: k141_119514_4
Type: CAZyme
Location: 3602 - 6850 (-)
Type: CAZyme
Location: 3602 - 6850 (-)
Gene ID: k141_119514_5
Type: CAZyme
Location: 6913 - 9141 (-)
Type: CAZyme
Location: 6913 - 9141 (-)
Gene ID: k141_119514_6
Type: pfam
Location: 9179 - 11755 (-)
Type: pfam
Location: 9179 - 11755 (-)
Gene ID: k141_119514_7
Type: pfam
Location: 11772 - 13691 (-)
Type: pfam
Location: 11772 - 13691 (-)
Gene ID: k141_119514_8
Type: CAZyme
Location: 13740 - 16868 (-)
Type: CAZyme
Location: 13740 - 16868 (-)
Gene ID: k141_119514_9
Type: pfam
Location: 16878 - 18140 (-)
Type: pfam
Location: 16878 - 18140 (-)
Gene ID: k141_119514_10
Type: STP
Location: 18153 - 19604 (-)
Type: STP
Location: 18153 - 19604 (-)
Gene ID: k141_119514_11
Type: TC
Location: 19670 - 20548 (-)
Type: TC
Location: 19670 - 20548 (-)
Gene ID: k141_119514_12
Type: TC
Location: 20570 - 21520 (-)
Type: TC
Location: 20570 - 21520 (-)
Gene ID: k141_119514_13
Type: TF
Location: 21828 - 23270 (+)
Type: TF
Location: 21828 - 23270 (+)
Gene ID: k141_119514_14
Type: TC
Location: 23296 - 24999 (+)
Type: TC
Location: 23296 - 24999 (+)
Gene ID: k141_119514_15
Type: pfam
Location: 25280 - 25924 (+)
Type: pfam
Location: 25280 - 25924 (+)
Gene ID: k141_119514_16
Type: TC
Location: 25968 - 27728 (+)
Type: TC
Location: 25968 - 27728 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
JAQXZB01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.