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Cluster: CGMR099603_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_34374 k141_34374_25 28569 29714 + CE9
TF k141_34374 k141_34374_26 29796 30497 + GntR
CAZyme k141_34374 k141_34374_27 30770 31495 + GT26
pfam k141_34374 k141_34374_28 31604 33082 + NAPRTase | NAPRTase_N | NAPRTase_C
pfam k141_34374 k141_34374_29 33239 34066 + NAD_synthase
TC k141_34374 k141_34374_30 34358 37006 + 3.A.3.2.28
NULL(UNKNOWN) k141_34374 k141_34374_31 37167 37601 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_34374 k141_34374_32 37689 38657 - GFO_IDH_MocA | GFO_IDH_MocA_C3
CAZyme k141_34374 k141_34374_33 38805 39431 + GH73
STP k141_34374 k141_34374_34 39737 40321 + Pribosyltran
TC k141_34374 k141_34374_35 40330 41655 + 2.A.40.3.1
Gene ID: k141_34374_25
Type: CAZyme
Location: 28569 - 29714 (+)
Gene ID: k141_34374_26
Type: TF
Location: 29796 - 30497 (+)
Gene ID: k141_34374_27
Type: CAZyme
Location: 30770 - 31495 (+)
Gene ID: k141_34374_28
Type: pfam
Location: 31604 - 33082 (+)
Gene ID: k141_34374_29
Type: pfam
Location: 33239 - 34066 (+)
Gene ID: k141_34374_30
Type: TC
Location: 34358 - 37006 (+)
Gene ID: k141_34374_31
Type:
Location: 37167 - 37601 (+)
Gene ID: k141_34374_32
Type: pfam
Location: 37689 - 38657 (-)
Gene ID: k141_34374_33
Type: CAZyme
Location: 38805 - 39431 (+)
Gene ID: k141_34374_34
Type: STP
Location: 39737 - 40321 (+)
Gene ID: k141_34374_35
Type: TC
Location: 40330 - 41655 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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