Cluster: CGMR099537_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR099537
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_276079 | k141_276079_15 | 17170 | 19809 | - | GH36 |
| CAZyme | k141_276079 | k141_276079_16 | 19934 | 21550 | - | GH20 |
| pfam | k141_276079 | k141_276079_17 | 22437 | 23555 | - | SUFBD_core |
| pfam | k141_276079 | k141_276079_18 | 23580 | 24980 | - | SUFBD_core | SufBD_N |
| TC | k141_276079 | k141_276079_19 | 24982 | 25731 | - | 3.A.1.21.2 |
| TF | k141_276079 | k141_276079_20 | 25744 | 26139 | - | FUR |
| CAZyme | k141_276079 | k141_276079_21 | 26305 | 28866 | - | GH36 |
Gene ID: k141_276079_15
Type: CAZyme
Location: 17170 - 19809 (-)
Type: CAZyme
Location: 17170 - 19809 (-)
Gene ID: k141_276079_16
Type: CAZyme
Location: 19934 - 21550 (-)
Type: CAZyme
Location: 19934 - 21550 (-)
Gene ID: k141_276079_17
Type: pfam
Location: 22437 - 23555 (-)
Type: pfam
Location: 22437 - 23555 (-)
Gene ID: k141_276079_18
Type: pfam
Location: 23580 - 24980 (-)
Type: pfam
Location: 23580 - 24980 (-)
Gene ID: k141_276079_19
Type: TC
Location: 24982 - 25731 (-)
Type: TC
Location: 24982 - 25731 (-)
Gene ID: k141_276079_20
Type: TF
Location: 25744 - 26139 (-)
Type: TF
Location: 25744 - 26139 (-)
Gene ID: k141_276079_21
Type: CAZyme
Location: 26305 - 28866 (-)
Type: CAZyme
Location: 26305 - 28866 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.