Cluster: CGMR099537_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR099537
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1026644 | k141_1026644_2 | 1109 | 2194 | - | GT28 |
| TC | k141_1026644 | k141_1026644_3 | 2191 | 3339 | - | 2.A.103.1.3 |
| pfam | k141_1026644 | k141_1026644_4 | 3359 | 4240 | - | LysM | LysM |
| pfam | k141_1026644 | k141_1026644_5 | 4262 | 5572 | - | Mur_ligase_C | Mur_ligase_M |
| TC | k141_1026644 | k141_1026644_6 | 5597 | 6622 | - | 9.B.146.1.6 |
Gene ID: k141_1026644_2
Type: CAZyme
Location: 1109 - 2194 (-)
Type: CAZyme
Location: 1109 - 2194 (-)
Gene ID: k141_1026644_3
Type: TC
Location: 2191 - 3339 (-)
Type: TC
Location: 2191 - 3339 (-)
Gene ID: k141_1026644_4
Type: pfam
Location: 3359 - 4240 (-)
Type: pfam
Location: 3359 - 4240 (-)
Gene ID: k141_1026644_5
Type: pfam
Location: 4262 - 5572 (-)
Type: pfam
Location: 4262 - 5572 (-)
Gene ID: k141_1026644_6
Type: TC
Location: 5597 - 6622 (-)
Type: TC
Location: 5597 - 6622 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.