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Cluster: CGMR099442_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_197334 k141_197334_11 16532 17632 + 1.B.42.1.2
TC k141_197334 k141_197334_12 17632 18714 + 1.B.42.1.2
STP k141_197334 k141_197334_13 18850 21183 + HATPase_c | HisKA | PAS | Response_reg
peptidase k141_197334 k141_197334_14 21412 22068 + C56.975
CAZyme k141_197334 k141_197334_15 22065 22790 + GT51
TC k141_197334 k141_197334_16 22830 23102 - 8.A.8.1.5
pfam k141_197334 k141_197334_17 23099 23953 - RapZ-like_N | PapZ_C
TC k141_197334 k141_197334_18 23999 24490 - 4.A.2.1.4
pfam k141_197334 k141_197334_19 24573 24860 - Ribosomal_S30AE
pfam k141_197334 k141_197334_20 24883 26316 - Sigma54_AID | Sigma54_DBD | Sigma54_CBD
TC k141_197334 k141_197334_21 26364 27089 - 1.B.42.1.2
TC k141_197334 k141_197334_22 27096 27650 - 1.B.42.1.2
TC k141_197334 k141_197334_23 27619 28194 - 1.B.42.1.2
pfam k141_197334 k141_197334_24 28191 28757 - Hydrolase_3
STP k141_197334 k141_197334_25 28772 29758 - CBS | CBS | SIS
TC k141_197334 k141_197334_26 29772 30749 - 2.A.19.5.1
TC k141_197334 k141_197334_27 30978 31790 + 3.A.1.27.3
TC k141_197334 k141_197334_28 31798 32580 + 3.A.1.27.3
TC k141_197334 k141_197334_29 32585 33133 + 3.A.1.27.3
TC k141_197334 k141_197334_30 33152 33787 + 3.A.1.27.3
TC k141_197334 k141_197334_31 33787 34080 + 3.A.1.27.3
Gene ID: k141_197334_11
Type: TC
Location: 16532 - 17632 (+)
Gene ID: k141_197334_12
Type: TC
Location: 17632 - 18714 (+)
Gene ID: k141_197334_13
Type: STP
Location: 18850 - 21183 (+)
Gene ID: k141_197334_14
Type: peptidase
Location: 21412 - 22068 (+)
Gene ID: k141_197334_15
Type: CAZyme
Location: 22065 - 22790 (+)
Gene ID: k141_197334_16
Type: TC
Location: 22830 - 23102 (-)
Gene ID: k141_197334_17
Type: pfam
Location: 23099 - 23953 (-)
Gene ID: k141_197334_18
Type: TC
Location: 23999 - 24490 (-)
Gene ID: k141_197334_19
Type: pfam
Location: 24573 - 24860 (-)
Gene ID: k141_197334_20
Type: pfam
Location: 24883 - 26316 (-)
Gene ID: k141_197334_21
Type: TC
Location: 26364 - 27089 (-)
Gene ID: k141_197334_22
Type: TC
Location: 27096 - 27650 (-)
Gene ID: k141_197334_23
Type: TC
Location: 27619 - 28194 (-)
Gene ID: k141_197334_24
Type: pfam
Location: 28191 - 28757 (-)
Gene ID: k141_197334_25
Type: STP
Location: 28772 - 29758 (-)
Gene ID: k141_197334_26
Type: TC
Location: 29772 - 30749 (-)
Gene ID: k141_197334_27
Type: TC
Location: 30978 - 31790 (+)
Gene ID: k141_197334_28
Type: TC
Location: 31798 - 32580 (+)
Gene ID: k141_197334_29
Type: TC
Location: 32585 - 33133 (+)
Gene ID: k141_197334_30
Type: TC
Location: 33152 - 33787 (+)
Gene ID: k141_197334_31
Type: TC
Location: 33787 - 34080 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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