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Cluster: CGMR099442_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_169051 k141_169051_61 71468 72358 + 3.A.1.1.11
TC k141_169051 k141_169051_62 72351 73253 + 3.A.1.1.11
TC k141_169051 k141_169051_63 73266 74393 + 3.A.1.1.11
TC k141_169051 k141_169051_64 74407 75693 + 3.A.1.1.11
TC k141_169051 k141_169051_65 75766 77181 - 2.A.1.1.2
pfam k141_169051 k141_169051_66 77494 78255 - adh_short | KR | adh_short_C2
pfam k141_169051 k141_169051_67 78319 79227 - KduI
CAZyme k141_169051 k141_169051_68 79453 80628 + PL22 | PL22
TC k141_169051 k141_169051_69 80737 81420 - 1.B.35.1.5
pfam k141_169051 k141_169051_70 81662 82840 - Thiolase_N | ketoacyl-synt | Thiolase_C
TF k141_169051 k141_169051_71 82934 83800 - HTH_1
TC k141_169051 k141_169051_72 83906 84367 + 2.A.117.1.3
TC k141_169051 k141_169051_73 84487 85716 + 2.A.42.2.5
pfam k141_169051 k141_169051_74 85752 86024 - Acetyltransf_1 | Acetyltransf_CG
pfam k141_169051 k141_169051_75 86035 86265 - Fer4_19
TC k141_169051 k141_169051_76 86328 86996 - 3.A.1.24.5
TC k141_169051 k141_169051_77 86984 87502 - 3.A.1.24.2
Gene ID: k141_169051_61
Type: TC
Location: 71468 - 72358 (+)
Gene ID: k141_169051_62
Type: TC
Location: 72351 - 73253 (+)
Gene ID: k141_169051_63
Type: TC
Location: 73266 - 74393 (+)
Gene ID: k141_169051_64
Type: TC
Location: 74407 - 75693 (+)
Gene ID: k141_169051_65
Type: TC
Location: 75766 - 77181 (-)
Gene ID: k141_169051_66
Type: pfam
Location: 77494 - 78255 (-)
Gene ID: k141_169051_67
Type: pfam
Location: 78319 - 79227 (-)
Gene ID: k141_169051_68
Type: CAZyme
Location: 79453 - 80628 (+)
Gene ID: k141_169051_69
Type: TC
Location: 80737 - 81420 (-)
Gene ID: k141_169051_70
Type: pfam
Location: 81662 - 82840 (-)
Gene ID: k141_169051_71
Type: TF
Location: 82934 - 83800 (-)
Gene ID: k141_169051_72
Type: TC
Location: 83906 - 84367 (+)
Gene ID: k141_169051_73
Type: TC
Location: 84487 - 85716 (+)
Gene ID: k141_169051_74
Type: pfam
Location: 85752 - 86024 (-)
Gene ID: k141_169051_75
Type: pfam
Location: 86035 - 86265 (-)
Gene ID: k141_169051_76
Type: TC
Location: 86328 - 86996 (-)
Gene ID: k141_169051_77
Type: TC
Location: 86984 - 87502 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_169051_64 vegetarian > omnivore 1.93845 0.02654
k141_169051_64 vegetarian > vegan 1.01262 0.03458
k141_169051_68 vegetarian > omnivore 1.76111 0.02654
k141_169051_68 vegetarian > vegan 1.51748 0.03458
k141_169051_69 vegetarian > vegan 1.06132 0.03458
k141_169051_70 vegetarian > omnivore 2.56377 0.01506
k141_169051_71 vegetarian > vegan 2.84666 0.03458
k141_169051_72 vegetarian > vegan 1.17122 0.03458
k141_169051_73 vegetarian > omnivore 1.59848 0.02654
k141_169051_73 vegetarian > vegan 1.07076 0.03458
k141_169051_75 vegetarian > vegan 2.04740 0.03458

🧭 Explore Read Mapping of CGC

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