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Cluster: CGMR099442_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_82121 k141_82121_3 1020 2510 + 4.A.1.1.2
STP k141_82121 k141_82121_4 2642 4306 + SBP_bac_5
TC k141_82121 k141_82121_5 4279 5301 - 2.A.52.1.1
pfam k141_82121 k141_82121_6 5303 7519 - Acylphosphatase | Sua5_yciO_yrdC | zf-HYPF | zf-HYPF | HypF_C | HypF_C_2
TC k141_82121 k141_82121_7 7526 8071 - 5.A.3.11.1
TF k141_82121 k141_82121_8 8206 9321 - LacI
TC k141_82121 k141_82121_9 9435 10886 + 4.A.1.2.3
CAZyme k141_82121 k141_82121_10 10905 12329 + GH1
peptidase k141_82121 k141_82121_11 12390 12851 - A31.003
pfam k141_82121 k141_82121_12 12844 13254 - HycH
TC k141_82121 k141_82121_13 13251 14018 - 3.D.1.9.2
TC k141_82121 k141_82121_14 14018 14560 - 3.D.1.9.2
TC k141_82121 k141_82121_15 14570 16279 - 3.D.1.9.2
TC k141_82121 k141_82121_16 16295 17218 - 3.D.1.9.2
TC k141_82121 k141_82121_17 17220 19034 - 3.D.1.9.2
TC k141_82121 k141_82121_18 19031 19639 - 3.D.1.9.2
Gene ID: k141_82121_3
Type: TC
Location: 1020 - 2510 (+)
Gene ID: k141_82121_4
Type: STP
Location: 2642 - 4306 (+)
Gene ID: k141_82121_5
Type: TC
Location: 4279 - 5301 (-)
Gene ID: k141_82121_6
Type: pfam
Location: 5303 - 7519 (-)
Gene ID: k141_82121_7
Type: TC
Location: 7526 - 8071 (-)
Gene ID: k141_82121_8
Type: TF
Location: 8206 - 9321 (-)
Gene ID: k141_82121_9
Type: TC
Location: 9435 - 10886 (+)
Gene ID: k141_82121_10
Type: CAZyme
Location: 10905 - 12329 (+)
Gene ID: k141_82121_11
Type: peptidase
Location: 12390 - 12851 (-)
Gene ID: k141_82121_12
Type: pfam
Location: 12844 - 13254 (-)
Gene ID: k141_82121_13
Type: TC
Location: 13251 - 14018 (-)
Gene ID: k141_82121_14
Type: TC
Location: 14018 - 14560 (-)
Gene ID: k141_82121_15
Type: TC
Location: 14570 - 16279 (-)
Gene ID: k141_82121_16
Type: TC
Location: 16295 - 17218 (-)
Gene ID: k141_82121_17
Type: TC
Location: 17220 - 19034 (-)
Gene ID: k141_82121_18
Type: TC
Location: 19031 - 19639 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_82121_8 vegetarian > omnivore 1.05522 0.02654
k141_82121_10 vegan > omnivore 1.35166 0.04660
k141_82121_11 vegetarian > vegan 1.12592 0.03458

🧭 Explore Read Mapping of CGC

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