Cluster: CGMR099442_CGC37
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR099442
- CGC Family ID: CGCFAM_00788
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_133910 | k141_133910_1 | 1 | 1278 | - | GH19 |
| CAZyme | k141_133910 | k141_133910_2 | 1415 | 1867 | - | GH23 |
| CAZyme | k141_133910 | k141_133910_3 | 2004 | 4706 | - | GH18 |
| TC | k141_133910 | k141_133910_4 | 4970 | 5767 | - | 3.A.15.1.1 |
| pfam | k141_133910 | k141_133910_5 | 5764 | 6249 | - | T2SSM |
| pfam | k141_133910 | k141_133910_6 | 6246 | 7325 | - | T2SSL | GspL_C |
| TC | k141_133910 | k141_133910_7 | 7392 | 8408 | - | 3.A.15.1.1 |
| TC | k141_133910 | k141_133910_8 | 8405 | 9064 | - | 3.A.15.3.1 |
| TC | k141_133910 | k141_133910_9 | 9061 | 9435 | - | 3.A.15.1.1 |
| pfam | k141_133910 | k141_133910_10 | 9428 | 9913 | - | N_methyl | GspH |
| TC | k141_133910 | k141_133910_11 | 9913 | 10362 | - | 3.A.15.1.1 |
| TC | k141_133910 | k141_133910_12 | 10365 | 11573 | - | 3.A.15.1.1 |
| TC | k141_133910 | k141_133910_13 | 11573 | 13051 | - | 3.A.15.1.1 |
| TC | k141_133910 | k141_133910_14 | 13065 | 14993 | - | 1.B.22.1.1 |
Gene ID: k141_133910_1
Type: CAZyme
Location: 1 - 1278 (-)
Type: CAZyme
Location: 1 - 1278 (-)
Gene ID: k141_133910_2
Type: CAZyme
Location: 1415 - 1867 (-)
Type: CAZyme
Location: 1415 - 1867 (-)
Gene ID: k141_133910_3
Type: CAZyme
Location: 2004 - 4706 (-)
Type: CAZyme
Location: 2004 - 4706 (-)
Gene ID: k141_133910_4
Type: TC
Location: 4970 - 5767 (-)
Type: TC
Location: 4970 - 5767 (-)
Gene ID: k141_133910_5
Type: pfam
Location: 5764 - 6249 (-)
Type: pfam
Location: 5764 - 6249 (-)
Gene ID: k141_133910_6
Type: pfam
Location: 6246 - 7325 (-)
Type: pfam
Location: 6246 - 7325 (-)
Gene ID: k141_133910_7
Type: TC
Location: 7392 - 8408 (-)
Type: TC
Location: 7392 - 8408 (-)
Gene ID: k141_133910_8
Type: TC
Location: 8405 - 9064 (-)
Type: TC
Location: 8405 - 9064 (-)
Gene ID: k141_133910_9
Type: TC
Location: 9061 - 9435 (-)
Type: TC
Location: 9061 - 9435 (-)
Gene ID: k141_133910_10
Type: pfam
Location: 9428 - 9913 (-)
Type: pfam
Location: 9428 - 9913 (-)
Gene ID: k141_133910_11
Type: TC
Location: 9913 - 10362 (-)
Type: TC
Location: 9913 - 10362 (-)
Gene ID: k141_133910_12
Type: TC
Location: 10365 - 11573 (-)
Type: TC
Location: 10365 - 11573 (-)
Gene ID: k141_133910_13
Type: TC
Location: 11573 - 13051 (-)
Type: TC
Location: 11573 - 13051 (-)
Gene ID: k141_133910_14
Type: TC
Location: 13065 - 14993 (-)
Type: TC
Location: 13065 - 14993 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter dissolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_133910_1 | vegetarian > omnivore | 1.53447 | 0.02654 |
| k141_133910_11 | vegan > omnivore | 16.27808 | 0.03603 |
| k141_133910_11 | vegetarian > omnivore | 15.90288 | 0.02009 |
| k141_133910_12 | vegetarian > omnivore | 1.39918 | 0.02654 |
| k141_133910_14 | vegetarian > omnivore | 1.23735 | 0.02654 |