Cluster: CGMR099442_CGC28
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR099442
- CGC Family ID: CGCFAM_00236
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_139478 | k141_139478_23 | 21929 | 22963 | - | 9.B.8.3.4 |
| pfam | k141_139478 | k141_139478_24 | 22960 | 23829 | - | HTH_31 | MLTR_LBD |
| TC | k141_139478 | k141_139478_25 | 23937 | 25373 | + | 2.A.1.3.38 |
| TC | k141_139478 | k141_139478_26 | 25438 | 26682 | + | 1.A.23.4.5 |
| TF | k141_139478 | k141_139478_27 | 26683 | 27654 | - | LacI |
| CAZyme | k141_139478 | k141_139478_28 | 27730 | 28872 | - | GH109 |
| pfam | k141_139478 | k141_139478_29 | 28865 | 29890 | - | AP_endonuc_2 |
| TC | k141_139478 | k141_139478_30 | 29906 | 31144 | - | 2.A.1.10.4 |
Gene ID: k141_139478_23
Type: TC
Location: 21929 - 22963 (-)
Type: TC
Location: 21929 - 22963 (-)
Gene ID: k141_139478_24
Type: pfam
Location: 22960 - 23829 (-)
Type: pfam
Location: 22960 - 23829 (-)
Gene ID: k141_139478_25
Type: TC
Location: 23937 - 25373 (+)
Type: TC
Location: 23937 - 25373 (+)
Gene ID: k141_139478_26
Type: TC
Location: 25438 - 26682 (+)
Type: TC
Location: 25438 - 26682 (+)
Gene ID: k141_139478_27
Type: TF
Location: 26683 - 27654 (-)
Type: TF
Location: 26683 - 27654 (-)
Gene ID: k141_139478_28
Type: CAZyme
Location: 27730 - 28872 (-)
Type: CAZyme
Location: 27730 - 28872 (-)
Gene ID: k141_139478_29
Type: pfam
Location: 28865 - 29890 (-)
Type: pfam
Location: 28865 - 29890 (-)
Gene ID: k141_139478_30
Type: TC
Location: 29906 - 31144 (-)
Type: TC
Location: 29906 - 31144 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter dissolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_139478_24 | vegetarian > omnivore | 1.37210 | 0.02654 |
| k141_139478_24 | vegetarian > vegan | 1.03356 | 0.03458 |
| k141_139478_25 | vegetarian > omnivore | 1.91132 | 0.02654 |
| k141_139478_27 | vegan > omnivore | 1.46156 | 0.02850 |
| k141_139478_27 | vegetarian > omnivore | 1.74491 | 0.02654 |
| k141_139478_28 | vegetarian > omnivore | 1.14998 | 0.02654 |