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Cluster: CGMR099442_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_195075 k141_195075_43 41770 42960 + 2.A.1.2.26
TC k141_195075 k141_195075_44 43010 43915 - 2.A.7.3.12
pfam k141_195075 k141_195075_45 44060 45439 - LamB
TC k141_195075 k141_195075_46 45574 45876 - 4.A.3.2.1
CAZyme k141_195075 k141_195075_47 45888 47261 - GH1
TC k141_195075 k141_195075_48 47279 48604 - 4.A.3.2.6
TC k141_195075 k141_195075_49 48616 48930 - 4.A.3.2.6
TF k141_195075 k141_195075_50 49224 50174 + LacI
NULL(UNKNOWN) k141_195075 k141_195075_51 50236 50532 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_195075 k141_195075_52 50652 52016 - 2.A.6.2.19
TC k141_195075 k141_195075_53 52016 55126 - 2.A.6.2.19
TC k141_195075 k141_195075_54 55126 56250 - 2.A.6.2.19
STP k141_195075 k141_195075_55 56396 56965 - TetR_N
pfam k141_195075 k141_195075_56 57152 57571 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
TC k141_195075 k141_195075_57 57778 58578 + 3.A.1.24.1
Gene ID: k141_195075_43
Type: TC
Location: 41770 - 42960 (+)
Gene ID: k141_195075_44
Type: TC
Location: 43010 - 43915 (-)
Gene ID: k141_195075_45
Type: pfam
Location: 44060 - 45439 (-)
Gene ID: k141_195075_46
Type: TC
Location: 45574 - 45876 (-)
Gene ID: k141_195075_47
Type: CAZyme
Location: 45888 - 47261 (-)
Gene ID: k141_195075_48
Type: TC
Location: 47279 - 48604 (-)
Gene ID: k141_195075_49
Type: TC
Location: 48616 - 48930 (-)
Gene ID: k141_195075_50
Type: TF
Location: 49224 - 50174 (+)
Gene ID: k141_195075_51
Type:
Location: 50236 - 50532 (-)
Gene ID: k141_195075_52
Type: TC
Location: 50652 - 52016 (-)
Gene ID: k141_195075_53
Type: TC
Location: 52016 - 55126 (-)
Gene ID: k141_195075_54
Type: TC
Location: 55126 - 56250 (-)
Gene ID: k141_195075_55
Type: STP
Location: 56396 - 56965 (-)
Gene ID: k141_195075_56
Type: pfam
Location: 57152 - 57571 (+)
Gene ID: k141_195075_57
Type: TC
Location: 57778 - 58578 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_195075_44 vegetarian > omnivore 1.30431 0.02654
k141_195075_45 vegetarian > omnivore 1.13693 0.02654
k141_195075_45 vegetarian > vegan 1.54669 0.03458
k141_195075_46 vegetarian > omnivore 1.75858 0.02654
k141_195075_47 vegetarian > omnivore 1.15314 0.02654
k141_195075_48 vegetarian > omnivore 1.42975 0.02654
k141_195075_48 vegetarian > vegan 1.09678 0.03458
k141_195075_49 vegetarian > omnivore 1.70393 0.02654
k141_195075_49 vegetarian > vegan 1.12769 0.03458
k141_195075_50 vegetarian > omnivore 1.09820 0.02654
k141_195075_51 vegetarian > omnivore 1.02882 0.02654
k141_195075_52 vegetarian > omnivore 1.60912 0.02654
k141_195075_52 vegetarian > vegan 1.30334 0.03458
k141_195075_54 vegetarian > omnivore 2.88152 0.02654
k141_195075_56 vegetarian > omnivore 1.75142 0.02654

🧭 Explore Read Mapping of CGC

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