Cluster: CGMR099442_CGC20
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR099442
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_195075 | k141_195075_16 | 15846 | 17507 | + | 2.A.81.1.5 |
| TF | k141_195075 | k141_195075_17 | 17475 | 18221 | - | GntR |
| TC | k141_195075 | k141_195075_18 | 18444 | 20066 | + | 4.A.1.1.10 |
| CAZyme | k141_195075 | k141_195075_19 | 20063 | 21385 | + | GH4 |
| TC | k141_195075 | k141_195075_20 | 21478 | 21825 | + | 9.B.51.1.1 |
| pfam | k141_195075 | k141_195075_21 | 21815 | 22162 | + | DUF202 |
| STP | k141_195075 | k141_195075_22 | 22197 | 23483 | - | PALP |
| TC | k141_195075 | k141_195075_23 | 23501 | 24838 | - | 2.A.8.1.5 |
| TF | k141_195075 | k141_195075_24 | 25043 | 25969 | + | HTH_1 |
| CAZyme | k141_195075 | k141_195075_25 | 26054 | 27142 | + | GH5_25 |
| TC | k141_195075 | k141_195075_26 | 27045 | 28202 | - | 2.A.1.2.9 |
| TC | k141_195075 | k141_195075_27 | 28405 | 29238 | - | 2.A.7.31.3 |
Gene ID: k141_195075_16
Type: TC
Location: 15846 - 17507 (+)
Type: TC
Location: 15846 - 17507 (+)
Gene ID: k141_195075_17
Type: TF
Location: 17475 - 18221 (-)
Type: TF
Location: 17475 - 18221 (-)
Gene ID: k141_195075_18
Type: TC
Location: 18444 - 20066 (+)
Type: TC
Location: 18444 - 20066 (+)
Gene ID: k141_195075_19
Type: CAZyme
Location: 20063 - 21385 (+)
Type: CAZyme
Location: 20063 - 21385 (+)
Gene ID: k141_195075_20
Type: TC
Location: 21478 - 21825 (+)
Type: TC
Location: 21478 - 21825 (+)
Gene ID: k141_195075_21
Type: pfam
Location: 21815 - 22162 (+)
Type: pfam
Location: 21815 - 22162 (+)
Gene ID: k141_195075_22
Type: STP
Location: 22197 - 23483 (-)
Type: STP
Location: 22197 - 23483 (-)
Gene ID: k141_195075_23
Type: TC
Location: 23501 - 24838 (-)
Type: TC
Location: 23501 - 24838 (-)
Gene ID: k141_195075_24
Type: TF
Location: 25043 - 25969 (+)
Type: TF
Location: 25043 - 25969 (+)
Gene ID: k141_195075_25
Type: CAZyme
Location: 26054 - 27142 (+)
Type: CAZyme
Location: 26054 - 27142 (+)
Gene ID: k141_195075_26
Type: TC
Location: 27045 - 28202 (-)
Type: TC
Location: 27045 - 28202 (-)
Gene ID: k141_195075_27
Type: TC
Location: 28405 - 29238 (-)
Type: TC
Location: 28405 - 29238 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter dissolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_195075_21 | vegetarian > omnivore | 2.19508 | 0.02654 |
| k141_195075_21 | vegetarian > vegan | 1.06114 | 0.03458 |
| k141_195075_22 | vegetarian > omnivore | 1.58757 | 0.00396 |
| k141_195075_23 | vegetarian > omnivore | 1.82356 | 0.02654 |
| k141_195075_27 | vegetarian > omnivore | 1.77072 | 0.02654 |
| k141_195075_27 | vegetarian > vegan | 2.23625 | 0.03126 |