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Cluster: CGMR099442_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_141295 k141_141295_92 92977 94308 - GT2
CAZyme k141_141295 k141_141295_93 94301 96238 - CE4 | GH153 | GH153
TC k141_141295 k141_141295_94 96247 98727 - 1.B.55.1.1
TF k141_141295 k141_141295_95 99306 99884 + GerE
TC k141_141295 k141_141295_96 99964 101826 - 1.B.12.5.2
Gene ID: k141_141295_92
Type: CAZyme
Location: 92977 - 94308 (-)
Gene ID: k141_141295_93
Type: CAZyme
Location: 94301 - 96238 (-)
Gene ID: k141_141295_94
Type: TC
Location: 96247 - 98727 (-)
Gene ID: k141_141295_95
Type: TF
Location: 99306 - 99884 (+)
Gene ID: k141_141295_96
Type: TC
Location: 99964 - 101826 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_141295_92 vegetarian > omnivore 2.40576 0.02193
k141_141295_92 vegetarian > vegan 1.54233 0.03458
k141_141295_93 vegetarian > omnivore 1.64415 0.02654
k141_141295_93 vegetarian > vegan 1.67172 0.03458

🧭 Explore Read Mapping of CGC

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