Cluster: CGMR099442_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR099442
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_208780 | k141_208780_16 | 13324 | 14433 | + | 2.A.45.2.5 |
| TC | k141_208780 | k141_208780_17 | 14535 | 15629 | + | 8.A.1.1.2 |
| TC | k141_208780 | k141_208780_18 | 15626 | 17197 | + | 2.A.1.3.2 |
| TC | k141_208780 | k141_208780_19 | 17197 | 18720 | + | 1.B.17.3.8 |
| TC | k141_208780 | k141_208780_20 | 18827 | 19867 | + | 8.A.5.1.3 |
| CAZyme | k141_208780 | k141_208780_21 | 20015 | 21391 | + | GH1 |
| TC | k141_208780 | k141_208780_22 | 21443 | 22765 | + | 4.A.3.2.9 |
| TF | k141_208780 | k141_208780_23 | 22781 | 23497 | + | GntR |
| peptidase | k141_208780 | k141_208780_24 | 23541 | 24527 | - | C82.UPB |
| TC | k141_208780 | k141_208780_25 | 24683 | 26278 | + | 3.A.1.121.4 |
| CAZyme | k141_208780 | k141_208780_26 | 26460 | 28823 | - | GH31_2 |
| TC | k141_208780 | k141_208780_27 | 28841 | 30142 | - | 2.A.1.14.2 |
Gene ID: k141_208780_16
Type: TC
Location: 13324 - 14433 (+)
Type: TC
Location: 13324 - 14433 (+)
Gene ID: k141_208780_17
Type: TC
Location: 14535 - 15629 (+)
Type: TC
Location: 14535 - 15629 (+)
Gene ID: k141_208780_18
Type: TC
Location: 15626 - 17197 (+)
Type: TC
Location: 15626 - 17197 (+)
Gene ID: k141_208780_19
Type: TC
Location: 17197 - 18720 (+)
Type: TC
Location: 17197 - 18720 (+)
Gene ID: k141_208780_20
Type: TC
Location: 18827 - 19867 (+)
Type: TC
Location: 18827 - 19867 (+)
Gene ID: k141_208780_21
Type: CAZyme
Location: 20015 - 21391 (+)
Type: CAZyme
Location: 20015 - 21391 (+)
Gene ID: k141_208780_22
Type: TC
Location: 21443 - 22765 (+)
Type: TC
Location: 21443 - 22765 (+)
Gene ID: k141_208780_23
Type: TF
Location: 22781 - 23497 (+)
Type: TF
Location: 22781 - 23497 (+)
Gene ID: k141_208780_24
Type: peptidase
Location: 23541 - 24527 (-)
Type: peptidase
Location: 23541 - 24527 (-)
Gene ID: k141_208780_25
Type: TC
Location: 24683 - 26278 (+)
Type: TC
Location: 24683 - 26278 (+)
Gene ID: k141_208780_26
Type: CAZyme
Location: 26460 - 28823 (-)
Type: CAZyme
Location: 26460 - 28823 (-)
Gene ID: k141_208780_27
Type: TC
Location: 28841 - 30142 (-)
Type: TC
Location: 28841 - 30142 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter dissolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_208780_19 | vegetarian > omnivore | 1.67330 | 0.02654 |
| k141_208780_20 | vegetarian > omnivore | 1.97503 | 0.02654 |
| k141_208780_21 | vegetarian > omnivore | 1.15511 | 0.02654 |
| k141_208780_22 | vegetarian > omnivore | 1.08074 | 0.02654 |
| k141_208780_27 | vegetarian > omnivore | 1.41617 | 0.02654 |