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Cluster: CGMR099342_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_78191 k141_78191_124 123745 124743 + GH18
TF k141_78191 k141_78191_125 124971 125849 + HTH_AraC
TC k141_78191 k141_78191_126 126274 129234 + 1.B.14.6.13
TC k141_78191 k141_78191_127 129250 130884 + 8.A.46.2.1
pfam k141_78191 k141_78191_128 131055 132347 + MFS_1 | MFS_1
CAZyme k141_78191 k141_78191_129 132390 133361 + GH130_2
CAZyme k141_78191 k141_78191_130 133431 135701 + GH92
CAZyme k141_78191 k141_78191_131 135734 137161 + GH125
STP k141_78191 k141_78191_132 137208 139532 + PIG-L
CAZyme k141_78191 k141_78191_133 139603 141990 + GH18
pfam k141_78191 k141_78191_134 142177 143043 + ROK
CAZyme k141_78191 k141_78191_135 143056 145326 + GH92
pfam k141_78191 k141_78191_136 145359 145856 + MannoseP_isomer
CAZyme k141_78191 k141_78191_137 145960 148044 + GH97
CAZyme k141_78191 k141_78191_138 148044 150083 + GH65
TC k141_78191 k141_78191_139 150128 151477 - 2.A.1.1.55
Gene ID: k141_78191_124
Type: CAZyme
Location: 123745 - 124743 (+)
Gene ID: k141_78191_125
Type: TF
Location: 124971 - 125849 (+)
Gene ID: k141_78191_126
Type: TC
Location: 126274 - 129234 (+)
Gene ID: k141_78191_127
Type: TC
Location: 129250 - 130884 (+)
Gene ID: k141_78191_128
Type: pfam
Location: 131055 - 132347 (+)
Gene ID: k141_78191_129
Type: CAZyme
Location: 132390 - 133361 (+)
Gene ID: k141_78191_130
Type: CAZyme
Location: 133431 - 135701 (+)
Gene ID: k141_78191_131
Type: CAZyme
Location: 135734 - 137161 (+)
Gene ID: k141_78191_132
Type: STP
Location: 137208 - 139532 (+)
Gene ID: k141_78191_133
Type: CAZyme
Location: 139603 - 141990 (+)
Gene ID: k141_78191_134
Type: pfam
Location: 142177 - 143043 (+)
Gene ID: k141_78191_135
Type: CAZyme
Location: 143056 - 145326 (+)
Gene ID: k141_78191_136
Type: pfam
Location: 145359 - 145856 (+)
Gene ID: k141_78191_137
Type: CAZyme
Location: 145960 - 148044 (+)
Gene ID: k141_78191_138
Type: CAZyme
Location: 148044 - 150083 (+)
Gene ID: k141_78191_139
Type: TC
Location: 150128 - 151477 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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