dbCAN Logo

Cluster: CGMR099006_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_33293 k141_33293_47 52732 53175 + 4.A.6.1.16
pfam k141_33293 k141_33293_48 53175 53456 + YajC
TC k141_33293 k141_33293_49 53493 53975 + 4.A.6.1.4
TC k141_33293 k141_33293_50 54066 54866 + 4.A.6.1.4
TC k141_33293 k141_33293_51 54856 55938 + 4.A.6.1.4
TF k141_33293 k141_33293_52 56124 56855 + GntR
STP k141_33293 k141_33293_53 56970 58136 + SIS | SIS
CAZyme k141_33293 k141_33293_54 58255 59424 + CE9
Gene ID: k141_33293_47
Type: TC
Location: 52732 - 53175 (+)
Gene ID: k141_33293_48
Type: pfam
Location: 53175 - 53456 (+)
Gene ID: k141_33293_49
Type: TC
Location: 53493 - 53975 (+)
Gene ID: k141_33293_50
Type: TC
Location: 54066 - 54866 (+)
Gene ID: k141_33293_51
Type: TC
Location: 54856 - 55938 (+)
Gene ID: k141_33293_52
Type: TF
Location: 56124 - 56855 (+)
Gene ID: k141_33293_53
Type: STP
Location: 56970 - 58136 (+)
Gene ID: k141_33293_54
Type: CAZyme
Location: 58255 - 59424 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_33293_48 vegan > omnivore 1.09995 0.00566

🧭 Explore Read Mapping of CGC

← Back to Cluster List