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Cluster: CGMR099005_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6904 k141_6904_235 243757 244641 + 2.A.7.3.67
pfam k141_6904 k141_6904_236 244867 245610 + VirB8
TC k141_6904 k141_6904_237 245607 246428 + 3.A.7.5.1
TC k141_6904 k141_6904_238 246432 247727 + 3.A.7.3.1
TC k141_6904 k141_6904_239 247779 248882 + 3.A.7.5.1
CAZyme k141_6904 k141_6904_240 248879 249628 + GH23
pfam k141_6904 k141_6904_241 249634 249978 + TrbC
pfam k141_6904 k141_6904_242 249980 250282 + VirB3
TC k141_6904 k141_6904_243 250279 252699 + 3.A.7.2.1
Gene ID: k141_6904_235
Type: TC
Location: 243757 - 244641 (+)
Gene ID: k141_6904_236
Type: pfam
Location: 244867 - 245610 (+)
Gene ID: k141_6904_237
Type: TC
Location: 245607 - 246428 (+)
Gene ID: k141_6904_238
Type: TC
Location: 246432 - 247727 (+)
Gene ID: k141_6904_239
Type: TC
Location: 247779 - 248882 (+)
Gene ID: k141_6904_240
Type: CAZyme
Location: 248879 - 249628 (+)
Gene ID: k141_6904_241
Type: pfam
Location: 249634 - 249978 (+)
Gene ID: k141_6904_242
Type: pfam
Location: 249980 - 250282 (+)
Gene ID: k141_6904_243
Type: TC
Location: 250279 - 252699 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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