Cluster: CGMR099005_CGC50
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR099005
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6904 | k141_6904_10 | 9512 | 10759 | + | 3.A.1.1.30 |
| TC | k141_6904 | k141_6904_11 | 10854 | 11732 | + | 3.A.1.1.30 |
| TC | k141_6904 | k141_6904_12 | 11729 | 12610 | + | 3.A.1.1.30 |
| TC | k141_6904 | k141_6904_13 | 12615 | 13733 | + | 3.A.1.1.30 |
| pfam | k141_6904 | k141_6904_14 | 13747 | 15270 | + | GMC_oxred_N | GMC_oxred_C | NAD_binding_8 |
| pfam | k141_6904 | k141_6904_15 | 15267 | 16046 | + | adh_short | KR | adh_short_C2 |
| CAZyme | k141_6904 | k141_6904_16 | 16065 | 17720 | + | AA3_2 |
Gene ID: k141_6904_10
Type: TC
Location: 9512 - 10759 (+)
Type: TC
Location: 9512 - 10759 (+)
Gene ID: k141_6904_11
Type: TC
Location: 10854 - 11732 (+)
Type: TC
Location: 10854 - 11732 (+)
Gene ID: k141_6904_12
Type: TC
Location: 11729 - 12610 (+)
Type: TC
Location: 11729 - 12610 (+)
Gene ID: k141_6904_13
Type: TC
Location: 12615 - 13733 (+)
Type: TC
Location: 12615 - 13733 (+)
Gene ID: k141_6904_14
Type: pfam
Location: 13747 - 15270 (+)
Type: pfam
Location: 13747 - 15270 (+)
Gene ID: k141_6904_15
Type: pfam
Location: 15267 - 16046 (+)
Type: pfam
Location: 15267 - 16046 (+)
Gene ID: k141_6904_16
Type: CAZyme
Location: 16065 - 17720 (+)
Type: CAZyme
Location: 16065 - 17720 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Rhizobiaceae
Genus
Phyllobacterium
Species
Phyllobacterium calauticae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.