Cluster: CGMR099005_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR099005
- CGC Family ID: CGCFAM_00038
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_10199 | k141_10199_81 | 77598 | 78437 | + | 3.A.1.3.5 |
| TC | k141_10199 | k141_10199_82 | 78571 | 79293 | + | 3.A.1.3.5 |
| TC | k141_10199 | k141_10199_83 | 79303 | 80001 | + | 3.A.1.3.6 |
| TC | k141_10199 | k141_10199_84 | 80015 | 80815 | + | 3.A.1.3.23 |
| NULL(UNKNOWN) | k141_10199 | k141_10199_85 | 80793 | 81059 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_10199 | k141_10199_86 | 81312 | 82571 | - | Wzy_C |
| TC | k141_10199 | k141_10199_87 | 82568 | 84112 | - | 9.B.18.1.1 |
| CAZyme | k141_10199 | k141_10199_88 | 84202 | 85269 | - | GT4 |
Gene ID: k141_10199_81
Type: TC
Location: 77598 - 78437 (+)
Type: TC
Location: 77598 - 78437 (+)
Gene ID: k141_10199_82
Type: TC
Location: 78571 - 79293 (+)
Type: TC
Location: 78571 - 79293 (+)
Gene ID: k141_10199_83
Type: TC
Location: 79303 - 80001 (+)
Type: TC
Location: 79303 - 80001 (+)
Gene ID: k141_10199_84
Type: TC
Location: 80015 - 80815 (+)
Type: TC
Location: 80015 - 80815 (+)
Gene ID: k141_10199_85
Type:
Location: 80793 - 81059 (-)
Type:
Location: 80793 - 81059 (-)
Gene ID: k141_10199_86
Type: pfam
Location: 81312 - 82571 (-)
Type: pfam
Location: 81312 - 82571 (-)
Gene ID: k141_10199_87
Type: TC
Location: 82568 - 84112 (-)
Type: TC
Location: 82568 - 84112 (-)
Gene ID: k141_10199_88
Type: CAZyme
Location: 84202 - 85269 (-)
Type: CAZyme
Location: 84202 - 85269 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Rhizobiaceae
Genus
Phyllobacterium
Species
Phyllobacterium calauticae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.