Cluster: CGMR099005_CGC46
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR099005
- CGC Family ID: CGCFAM_09194
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4220 | k141_4220_31 | 29691 | 30101 | + | 1.A.77.2.6 |
| TC | k141_4220 | k141_4220_32 | 30137 | 30889 | + | 3.A.2.1.7 |
| TC | k141_4220 | k141_4220_33 | 30961 | 31188 | + | 3.A.2.1.7 |
| TC | k141_4220 | k141_4220_34 | 31282 | 31908 | + | 3.A.2.1.7 |
| TC | k141_4220 | k141_4220_35 | 31920 | 32399 | + | 3.A.2.1.7 |
| pfam | k141_4220 | k141_4220_36 | 32468 | 33049 | - | RNase_HII |
| pfam | k141_4220 | k141_4220_37 | 33264 | 34415 | - | Radical_SAM |
| CAZyme | k141_4220 | k141_4220_38 | 34564 | 35070 | + | GT2 |
Gene ID: k141_4220_31
Type: TC
Location: 29691 - 30101 (+)
Type: TC
Location: 29691 - 30101 (+)
Gene ID: k141_4220_32
Type: TC
Location: 30137 - 30889 (+)
Type: TC
Location: 30137 - 30889 (+)
Gene ID: k141_4220_33
Type: TC
Location: 30961 - 31188 (+)
Type: TC
Location: 30961 - 31188 (+)
Gene ID: k141_4220_34
Type: TC
Location: 31282 - 31908 (+)
Type: TC
Location: 31282 - 31908 (+)
Gene ID: k141_4220_35
Type: TC
Location: 31920 - 32399 (+)
Type: TC
Location: 31920 - 32399 (+)
Gene ID: k141_4220_36
Type: pfam
Location: 32468 - 33049 (-)
Type: pfam
Location: 32468 - 33049 (-)
Gene ID: k141_4220_37
Type: pfam
Location: 33264 - 34415 (-)
Type: pfam
Location: 33264 - 34415 (-)
Gene ID: k141_4220_38
Type: CAZyme
Location: 34564 - 35070 (+)
Type: CAZyme
Location: 34564 - 35070 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Rhizobiaceae
Genus
Phyllobacterium
Species
Phyllobacterium calauticae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.