Cluster: CGMR099005_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR099005
- CGC Family ID: CGCFAM_09192
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6841 | k141_6841_83 | 92003 | 92740 | - | 3.A.1.3.22 |
| TC | k141_6841 | k141_6841_84 | 92760 | 93452 | - | 3.A.1.3.4 |
| TC | k141_6841 | k141_6841_85 | 93452 | 94186 | - | 3.A.1.3.19 |
| TC | k141_6841 | k141_6841_86 | 94262 | 95164 | - | 3.A.1.3.22 |
| NULL(UNKNOWN) | k141_6841 | k141_6841_87 | 95347 | 95574 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | k141_6841 | k141_6841_88 | 95838 | 97637 | + | S09.UNW |
| CAZyme | k141_6841 | k141_6841_89 | 97641 | 100121 | - | GH2 |
Gene ID: k141_6841_83
Type: TC
Location: 92003 - 92740 (-)
Type: TC
Location: 92003 - 92740 (-)
Gene ID: k141_6841_84
Type: TC
Location: 92760 - 93452 (-)
Type: TC
Location: 92760 - 93452 (-)
Gene ID: k141_6841_85
Type: TC
Location: 93452 - 94186 (-)
Type: TC
Location: 93452 - 94186 (-)
Gene ID: k141_6841_86
Type: TC
Location: 94262 - 95164 (-)
Type: TC
Location: 94262 - 95164 (-)
Gene ID: k141_6841_87
Type:
Location: 95347 - 95574 (-)
Type:
Location: 95347 - 95574 (-)
Gene ID: k141_6841_88
Type: peptidase
Location: 95838 - 97637 (+)
Type: peptidase
Location: 95838 - 97637 (+)
Gene ID: k141_6841_89
Type: CAZyme
Location: 97641 - 100121 (-)
Type: CAZyme
Location: 97641 - 100121 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Rhizobiaceae
Genus
Phyllobacterium
Species
Phyllobacterium calauticae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.