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Cluster: CGMR099005_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_5242 k141_5242_9 9767 10627 + 3.A.1.1.4
TC k141_5242 k141_5242_10 10624 11460 + 3.A.1.1.4
TC k141_5242 k141_5242_11 11472 12560 + 3.A.1.1.4
CAZyme k141_5242 k141_5242_12 12623 14629 + GH179
pfam k141_5242 k141_5242_13 14676 15446 + AP_endonuc_2
TF k141_5242 k141_5242_14 15584 16582 + LacI
TC k141_5242 k141_5242_15 16628 17425 - 3.A.1.3.21
peptidase k141_5242 k141_5242_16 17422 18372 - T02.UPW
TC k141_5242 k141_5242_17 18375 19109 - 3.A.1.3.14
TC k141_5242 k141_5242_18 19111 19782 - 3.A.1.3.2
TC k141_5242 k141_5242_19 19782 20372 - 3.A.1.3.16
pfam k141_5242 k141_5242_20 20543 20881 - Cupin_1 | Cupin_2
pfam k141_5242 k141_5242_21 20988 21911 - AP_endonuc_2
TC k141_5242 k141_5242_22 21933 23054 - 3.A.1.1.4
TC k141_5242 k141_5242_23 23066 23953 - 3.A.1.1.3
TC k141_5242 k141_5242_24 23964 24860 - 3.A.1.1.3
TC k141_5242 k141_5242_25 24941 26284 - 3.A.1.1.3
pfam k141_5242 k141_5242_26 26479 27636 - FAA_hydrolase
TC k141_5242 k141_5242_27 27674 28750 - 3.A.1.1.10
TC k141_5242 k141_5242_28 28780 29604 - 3.A.1.1.25
TC k141_5242 k141_5242_29 29616 30542 - 3.A.1.1.7
Gene ID: k141_5242_9
Type: TC
Location: 9767 - 10627 (+)
Gene ID: k141_5242_10
Type: TC
Location: 10624 - 11460 (+)
Gene ID: k141_5242_11
Type: TC
Location: 11472 - 12560 (+)
Gene ID: k141_5242_12
Type: CAZyme
Location: 12623 - 14629 (+)
Gene ID: k141_5242_13
Type: pfam
Location: 14676 - 15446 (+)
Gene ID: k141_5242_14
Type: TF
Location: 15584 - 16582 (+)
Gene ID: k141_5242_15
Type: TC
Location: 16628 - 17425 (-)
Gene ID: k141_5242_16
Type: peptidase
Location: 17422 - 18372 (-)
Gene ID: k141_5242_17
Type: TC
Location: 18375 - 19109 (-)
Gene ID: k141_5242_18
Type: TC
Location: 19111 - 19782 (-)
Gene ID: k141_5242_19
Type: TC
Location: 19782 - 20372 (-)
Gene ID: k141_5242_20
Type: pfam
Location: 20543 - 20881 (-)
Gene ID: k141_5242_21
Type: pfam
Location: 20988 - 21911 (-)
Gene ID: k141_5242_22
Type: TC
Location: 21933 - 23054 (-)
Gene ID: k141_5242_23
Type: TC
Location: 23066 - 23953 (-)
Gene ID: k141_5242_24
Type: TC
Location: 23964 - 24860 (-)
Gene ID: k141_5242_25
Type: TC
Location: 24941 - 26284 (-)
Gene ID: k141_5242_26
Type: pfam
Location: 26479 - 27636 (-)
Gene ID: k141_5242_27
Type: TC
Location: 27674 - 28750 (-)
Gene ID: k141_5242_28
Type: TC
Location: 28780 - 29604 (-)
Gene ID: k141_5242_29
Type: TC
Location: 29616 - 30542 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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